RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 C14orf166Q9Y224 244 aaKnown RBP2.04□□□□□ -2.08
SQLE-202ENST00000518604 SLC22A14Q9Y267 594 aa2.04□□□□□ -2.08
SQLE-202ENST00000518604 ISLRO14498 428 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 SLC31A1O15431 190 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 PRPS1L1P21108 318 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 PRTN3P24158 256 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 NUP62P37198 522 aaPredicted RBP2.03□□□□□ -2.08
SQLE-202ENST00000518604 ATP5J2P56134 94 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 TNFRSF9Q07011 255 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 STX4Q12846 297 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 GUSBP1Q15486 140 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 ACTL10Q5JWF8 245 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 ZNF773Q6PK81 442 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 FAM19A1Q7Z5A9 133 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 OR6K3Q8NGY3 331 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 C2orf15Q8WU43 125 aaKnown RBP2.03□□□□□ -2.08
SQLE-202ENST00000518604 BLNKQ8WV28 456 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 NELFBQ8WX92 580 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 CACNG8Q8WXS5 425 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 DSN1Q9H410 356 aa2.03□□□□□ -2.08
SQLE-202ENST00000518604 PGPA6NDG6 321 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 F5H5P2 479 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 FFAR1O14842 300 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 AQP9O43315 295 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 PSCAO43653 123 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 SC5DO75845 299 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 IGHMP01871 453 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 SOD3P08294 240 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 CCDC172P0C7W6 258 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 CCNOP22674 350 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 CNTFRP26992 372 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 TGFBR2P37173 567 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 TTPAP49638 278 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 GZMMP51124 257 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 RAB38P57729 211 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 TMPPEQ6ZT21 453 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 GALNT10Q86SR1 603 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 ZFP82Q8N141 532 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 EIF4E3Q8N5X7 224 aaKnown RBP2.02□□□□□ -2.09
SQLE-202ENST00000518604 DRAXINQ8NBI3 349 aaPredicted RBP2.02□□□□□ -2.09
SQLE-202ENST00000518604 ZNF738Q8NE65 137 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 IGF2BP2-AS1Q96M15 143 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 ZNF75AQ96N20 296 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 RMND1Q9NWS8 449 aa2.02□□□□□ -2.09
SQLE-202ENST00000518604 ZNF706Q9Y5V0 76 aaPredicted RBP2.02□□□□□ -2.09
SQLE-202ENST00000518604 COL5A1P20908 1838 aaPredicted RBP2.01□□□□□ -2.09
SQLE-202ENST00000518604 A0A1B0GXF2 115 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 MYBPHLA2RUH7 354 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 ZNF729A6NN14 1252 aaPredicted RBP2.01□□□□□ -2.09
SQLE-202ENST00000518604 GGTLC3B5MD39 225 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 RANBP1P43487 201 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 GCLMP48507 274 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 ZNF83P51522 516 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 TMEM241Q24JQ0 296 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 KRTAP25-1Q3LHN0 102 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 LGALSLQ3ZCW2 172 aaPredicted RBP2.01□□□□□ -2.09
SQLE-202ENST00000518604 TPGS1Q6ZTW0 290 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 DPPA2Q7Z7J5 298 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 ST13P4Q8IZP2 240 aaPredicted RBP2.01□□□□□ -2.09
SQLE-202ENST00000518604 PDCL2Q8N4E4 241 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 SPICQ8N5J4 248 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 OR2M3Q8NG83 312 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 CCL17Q92583 94 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 APOBEC3DQ96AK3 386 aaPredicted RBP2.01□□□□□ -2.09
SQLE-202ENST00000518604 FXYD5Q96DB9 178 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 OLFM3Q96PB7 478 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 ANAPC13Q9BS18 74 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 BEX2Q9BXY8 128 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 ADAMTSL3P82987 1691 aa2.01□□□□□ -2.09
SQLE-202ENST00000518604 RBFOX3A6NFN3 312 aa2□□□□□ -2.09
SQLE-202ENST00000518604 MYO1DO94832 1006 aa2□□□□□ -2.09
SQLE-202ENST00000518604 IGKV1D-33P01593 117 aa2□□□□□ -2.09
SQLE-202ENST00000518604 IGKV1-33P01594 117 aa2□□□□□ -2.09
SQLE-202ENST00000518604 TRGV3P03979 118 aa2□□□□□ -2.09
SQLE-202ENST00000518604 IVLP07476 585 aa2□□□□□ -2.09
SQLE-202ENST00000518604 GIMD1P0DJR0 217 aa2□□□□□ -2.09
SQLE-202ENST00000518604 ZNF708P17019 499 aa2□□□□□ -2.09
SQLE-202ENST00000518604 VSNL1P62760 191 aa2□□□□□ -2.09
SQLE-202ENST00000518604 C2orf80Q0P641 193 aa2□□□□□ -2.09
SQLE-202ENST00000518604 GOLGA7BQ2TAP0 167 aa2□□□□□ -2.09
SQLE-202ENST00000518604 C18orf21Q32NC0 220 aaPredicted RBP2□□□□□ -2.09
SQLE-202ENST00000518604 ERICH5Q6P6B1 374 aa2□□□□□ -2.09
SQLE-202ENST00000518604 LYZL2Q7Z4W2 148 aa2□□□□□ -2.09
SQLE-202ENST00000518604 ACBD4Q8NC06 268 aa2□□□□□ -2.09
SQLE-202ENST00000518604 OR8G5Q8NG78 346 aa2□□□□□ -2.09
SQLE-202ENST00000518604 OR2K2Q8NGT1 345 aa2□□□□□ -2.09
SQLE-202ENST00000518604 CLHC1Q8NHS4 586 aa2□□□□□ -2.09
SQLE-202ENST00000518604 CASTOR1Q8WTX7 329 aa2□□□□□ -2.09
SQLE-202ENST00000518604 MSANTD3Q96H12 275 aa2□□□□□ -2.09
SQLE-202ENST00000518604 FMC1Q96HJ9 113 aa2□□□□□ -2.09
SQLE-202ENST00000518604 ZNF396Q96N95 335 aaPredicted RBP2□□□□□ -2.09
SQLE-202ENST00000518604 BIRC8Q96P09 236 aa2□□□□□ -2.09
SQLE-202ENST00000518604 PITX2Q99697 317 aa2□□□□□ -2.09
SQLE-202ENST00000518604 METTL8Q9H825 291 aaKnown RBP2□□□□□ -2.09
SQLE-202ENST00000518604 RBM12B-AS1Q9P1G2 102 aa2□□□□□ -2.09
SQLE-202ENST00000518604 ZNF443Q9Y2A4 671 aaPredicted RBP2□□□□□ -2.09
SQLE-202ENST00000518604 FADS3Q9Y5Q0 445 aa2□□□□□ -2.09
SQLE-202ENST00000518604 SDK2Q58EX2 2172 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 IGLV10-54A0A075B6I4 117 aa1.99□□□□□ -2.09
SQLE-202ENST00000518604 A8MWP4 228 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms