RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 GABRR1P24046 479 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 GP2P55259 537 aaKnown RBP18.09■□□□□ 0.49
VEGFA-217ENST00000518538 GPR157Q5UAW9 335 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 C1orf122Q6ZSJ8 110 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 GDPD3Q7L5L3 318 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 VMO1Q7Z5L0 202 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 BPIFB2Q8N4F0 458 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 JAGN1Q8N5M9 183 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 OR4M1Q8NGD0 313 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 OR10K1Q8NGX5 313 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 PPP1R35Q8TAP8 253 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 PHYHIPQ92561 330 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 S100A13Q99584 98 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 ING4Q9UNL4 249 aa18.09■□□□□ 0.49
VEGFA-217ENST00000518538 A0A0A6YYJ9 748 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 SIRPB1O00241 398 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 TCF21O43680 179 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 PSPNO60542 156 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 RGS9O75916 674 aaPredicted RBP18.08■□□□□ 0.48
VEGFA-217ENST00000518538 HTR3BO95264 441 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 LMO1P25800 156 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 GABRA5P31644 462 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 BPIFB3P59826 476 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 BLMHQ13867 455 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 GRK1Q15835 563 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 HSD17B12Q53GQ0 312 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 UBE2UQ5VVX9 321 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 TMEM200BQ69YZ2 307 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 Q6P435 159 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 ZNF773Q6PK81 442 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 TMEM91Q6ZNR0 172 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 C9orf139Q6ZV77 190 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 LYPD6Q86Y78 171 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 Q8N7P7 452 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 CHST4Q8NCG5 386 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 OR51T1Q8NGJ9 327 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 ZNF418Q8TF45 676 aaPredicted RBP18.08■□□□□ 0.48
VEGFA-217ENST00000518538 C22orf15Q8WYQ4 148 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 SLC6A7Q99884 636 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 MS4A7Q9GZW8 240 aaPredicted RBP18.08■□□□□ 0.48
VEGFA-217ENST00000518538 CHST6Q9GZX3 395 aa18.08■□□□□ 0.48
VEGFA-217ENST00000518538 A0A1W2PPH5 198 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 ZNF780AO75290 641 aaPredicted RBP18.07■□□□□ 0.48
VEGFA-217ENST00000518538 ZNF44P15621 663 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 OR3A1P47881 315 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 EDDM3BP56851 147 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 IL13RA2Q14627 380 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 SSX1Q16384 188 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 TUSC1Q2TAM9 212 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 KCTD21Q4G0X4 260 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 USP43Q70EL4 1123 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 OR4S1Q8NGB4 309 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 FCGR1BQ92637 280 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 MUL1Q969V5 352 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 UQCC2Q9BRT2 126 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 SUCNR1Q9BXA5 334 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 PPIL3Q9H2H8 161 aaKnown RBP18.07■□□□□ 0.48
VEGFA-217ENST00000518538 METTL8Q9H825 291 aaKnown RBP18.07■□□□□ 0.48
VEGFA-217ENST00000518538 PCDHB16Q9NRJ7 776 aa18.07■□□□□ 0.48
VEGFA-217ENST00000518538 MRPS28Q9Y2Q9 187 aaKnown RBP18.07■□□□□ 0.48
VEGFA-217ENST00000518538 CENPVL3A0A0U1RRI6 287 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 MGST3O14880 152 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 DEGS1O15121 323 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 CSTBP04080 98 aaKnown RBP18.06■□□□□ 0.48
VEGFA-217ENST00000518538 SRMP19623 302 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 SCN1BQ07699 218 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 GPR176Q14439 515 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 EDDM3AQ14507 147 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 NHLRC3Q5JS37 347 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 METAP1DQ6UB28 335 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-217ENST00000518538 LRRTM1Q86UE6 522 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 LHX4Q969G2 390 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 NR1H4Q96RI1 486 aaPredicted RBP18.06■□□□□ 0.48
VEGFA-217ENST00000518538 UNKLQ9H9P5 680 aaKnown RBP18.06■□□□□ 0.48
VEGFA-217ENST00000518538 SIRT7Q9NRC8 400 aa18.06■□□□□ 0.48
VEGFA-217ENST00000518538 MXRA5Q9NR99 2828 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 A0A0G2JK05 382 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 SLC33A1O00400 549 aaPredicted RBP18.05■□□□□ 0.48
VEGFA-217ENST00000518538 ARL6IP5O75915 188 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 SERPINA2P20848 420 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 ERP29P30040 261 aaKnown RBP18.05■□□□□ 0.48
VEGFA-217ENST00000518538 FABP5Q01469 135 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 ZNF273Q14593 569 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 PIGYQ3MUY2 71 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 SLC22A6Q4U2R8 563 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 AWAT2Q6E213 333 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 GLIPR1L1Q6UWM5 242 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 BRD3OSQ6XYD6 125 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 BCL6BQ8N143 479 aaPredicted RBP18.05■□□□□ 0.48
VEGFA-217ENST00000518538 OSR2Q8N2R0 312 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 OR4D6Q8NGJ1 314 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 FOXRED1Q96CU9 486 aaPredicted RBP18.05■□□□□ 0.48
VEGFA-217ENST00000518538 SLITRK2Q9H156 845 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 NDUFB11Q9NX14 153 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 CUBNO60494 3623 aa18.05■□□□□ 0.48
VEGFA-217ENST00000518538 IGHV1-69DA0A0B4J2H0 117 aa18.04■□□□□ 0.48
VEGFA-217ENST00000518538 IGHV1-69P01742 117 aa18.04■□□□□ 0.48
VEGFA-217ENST00000518538 CSN2P05814 226 aa18.04■□□□□ 0.48
VEGFA-217ENST00000518538 GTF2F2P13984 249 aa18.04■□□□□ 0.48
VEGFA-217ENST00000518538 PRTN3P24158 256 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms