RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SEC11AP67812 179 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 SIRPAP78324 504 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 BTG2P78543 158 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 HMGCS1Q01581 520 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 LTBQ06643 244 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 FHL2Q14192 279 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 GPNMBQ14956 572 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 CDK5R1Q15078 307 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF791Q3KP31 576 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 ACSF3Q4G176 576 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 PHYHD1Q5SRE7 291 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 DCST2Q5T1A1 773 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 KIAA0895LQ68EN5 471 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 RPL7L1Q6DKI1 246 aaKnown RBP4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 FAM180AQ6UWF9 173 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 Q6ZSN1 163 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 LHFPL2Q6ZUX7 228 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 SCD5Q86SK9 330 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 YRDCQ86U90 279 aaKnown RBP4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF584Q8IVC4 421 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 LINC00346Q8IVM7 164 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR8I2Q8N0Y5 310 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 MUC15Q8N387 334 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 DEFB125Q8N687 156 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 PNPLA1Q8N8W4 532 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZSCAN4Q8NAM6 433 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 APCDD1LQ8NCL9 501 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR2T33Q8NG76 320 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 GPR32P1Q8NGA4 272 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR10P1Q8NGE3 313 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR51T1Q8NGJ9 327 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR2I1PQ8NGU4 316 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR4K13Q8NH42 304 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 NFKBIDQ8NI38 313 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 VN1R17PQ8TDU5 208 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 MRPL24Q96A35 216 aaKnown RBP4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 MYADMQ96S97 322 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 AGMATQ9BSE5 352 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 NUDT9Q9BW91 350 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 WDR54Q9H977 334 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 CMC2Q9NRP2 79 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC7A10Q9NS82 523 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 FAM206AQ9NX38 181 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF319Q9P2F9 582 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF391Q9UJN7 358 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 PAM16Q9Y3D7 125 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 OARD1Q9Y530 152 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZSWIM8A7E2V4 1837 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 PHLPP1O60346 1717 aa4.2□□□□□ -1.74
HMGB1P19-201ENST00000517578 LY75O60449 1722 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 PPIAL4EA0A075B759 164 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRAV25A0A0B4J276 109 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 PPIAL4CA0A0B4J2A2 164 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRBV2A0A0J9YWF9 115 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 DUXBA0A1W2PPF3 345 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 A4D1N5 150 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 DIRC3C9JPN6 131 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 C17orf112F2Z3M2 114 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 PPIAL4DF5H284 164 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 G3V3Y1 287 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 J3QLW9 94 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 FFAR2O15552 330 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 GPR137BO60478 399 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 YPEL1O60688 119 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 RAMP1O60894 148 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 HYPMO75409 117 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 PPP1R3DO95685 299 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 CD3DP04234 171 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 PFN1P07737 140 aaKnown RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 IGLC1P0CG04 106 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 PPIAL4FP0DN26 164 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 PPIAL4GP0DN37 164 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 IL2RBP14784 551 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 USF1P22415 310 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 SERPINA4P29622 427 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 AQP1P29972 269 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 OTX2P32243 289 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 PYCR1P32322 319 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 GALR1P47211 349 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 LSSP48449 732 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 HTR6P50406 440 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TCL1AP56279 114 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TCTAP57738 103 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TAS2R41P59536 307 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 RND3P61587 244 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 MRPS34P82930 218 aaKnown RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 SMAD3P84022 425 aaKnown RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 ACSM2AQ08AH3 577 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 CAPSQ13938 189 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 MSMO1Q15800 293 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 HLA-BQ31612 363 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 C18orf21Q32NC0 220 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 NRN1LQ496H8 165 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TP53I3Q53FA7 332 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 GCSAMLQ5JQS6 135 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 FAM162BQ5T6X4 162 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 FAM78BQ5VT40 261 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 LYPLAL1Q5VWZ2 237 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 ACSM2BQ68CK6 577 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms