RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 ZNF665Q9H7R5 613 aa4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 UNKLQ9H9P5 680 aaKnown RBP4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 ELL3Q9HB65 397 aaPredicted RBP4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 LPAR2Q9HBW0 351 aa4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 VCX3AQ9NNX9 186 aa4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 NOX4Q9NPH5 578 aa4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 TMEM138Q9NPI0 162 aa4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 MIOXQ9UGB7 285 aa4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 ING4Q9UNL4 249 aa4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 FOXJ3Q9UPW0 622 aa4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 LRBAP50851 2863 aa4.84□□□□□ -1.63
SCARNA6.1-201ENST00000516989 CHD3Q12873 2000 aaKnown RBP4.84□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CSMD2Q7Z408 3487 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 A0A096LNT2 108 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TRBV5-7A0A0A0MS05 114 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CEACAM18A8MTB9 384 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SRRM5B3KS81 715 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM157AC9JC47 383 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DIRC3C9JPN6 131 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CCRL2O00421 344 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ADAM20O43506 726 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NDUFB3O43676 98 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NDUFA2O43678 99 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GPX5O75715 221 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NXPH2O95156 264 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LY6G6DO95868 133 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ALDOBP05062 364 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ELANEP08246 267 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 WNT2P09544 360 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CALCBP10092 127 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RPS2P15880 293 aaKnown RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MUC1P15941 1255 aaPredicted RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IGFBP3P17936 291 aaPredicted RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SRMP19623 302 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GABRA5P31644 462 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNF93P35789 620 aaPredicted RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NPBWR2P48146 333 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LMO4P61968 165 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IL24Q13007 206 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RSU1Q15404 277 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SSX1Q16384 188 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ZNF404Q494X3 552 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 HSD17B12Q53GQ0 312 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM27D1Q5T7N8 215 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 SYT6Q5T7P8 510 aaPredicted RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 DDI2Q5TDH0 399 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 UBE2UQ5VVX9 321 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TEX36Q5VZQ5 186 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ASPHD2Q6ICH7 369 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 LYPD2Q6UXB3 125 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ACP7Q6ZNF0 438 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TMEM91Q6ZNR0 172 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 BIVMQ86UB2 503 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 JAGN1Q8N5M9 183 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PNLDC1Q8NA58 520 aaKnown RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR8B3Q8NGG8 313 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TNFAIP8L1Q8WVP5 186 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MSI2Q96DH6 328 aaKnown RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CPNE2Q96FN4 548 aaPredicted RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CEP19Q96LK0 163 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR8B2Q96RD0 313 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NR1H4Q96RI1 486 aaPredicted RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CCL13Q99616 98 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NKX3-1Q99801 234 aaPredicted RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM192AQ9GZU8 254 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PPIL3Q9H2H8 161 aaKnown RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PATZ1Q9HBE1 687 aaKnown RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 EXOSC4Q9NPD3 245 aaKnown RBP4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 YAE1D1Q9NRH1 226 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RASL12Q9NYN1 266 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MTCH1Q9NZJ7 389 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NLKQ9UBE8 527 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR14J1Q9UGF5 321 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TACC2O95359 2948 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CSPG4Q6UVK1 2322 aa4.83□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TRAV8-7A0A075B6U6 113 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TRDV1A0A1B0GX56 115 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 MAGEA13PA6NCF6 341 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FAM90A20PA6NIJ5 464 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RFPL4AA6NLU0 287 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 OR2AT4A6NND4 320 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 B4DSR2 109 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 RFPL4AL1F8VTS6 287 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 F8VVB4 439 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 F8VWA3 439 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 GABRPO00591 440 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TNFRSF13BO14836 293 aaPredicted RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PHF1O43189 567 aaPredicted RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 NOS1APO75052 506 aaPredicted RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FOXH1O75593 365 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ARL6IP5O75915 188 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 CDRT1O95170 752 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 FSTL3O95633 263 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IGHV2-5P01817 119 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 TFF1P04155 84 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 ACAA1P09110 424 aaPredicted RBP4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PGA5P0DJD9 388 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 IGHV4-31P0DP07 118 aa4.82□□□□□ -1.64
SCARNA6.1-201ENST00000516989 PSG2P11465 335 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms