RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ADAT1Q9BUB4 502 aaKnown RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 ST6GALNAC5Q9BVH7 336 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 BEX2Q9BXY8 128 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 TMPRSS13Q9BYE2 586 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 CXXC4Q9H2H0 198 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 SEBOXQ9HB31 216 aaPredicted RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 BEX1Q9HBH7 125 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 ZNF286AQ9HBT8 521 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 C12orf4Q9NQ89 552 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 ASF1BQ9NVP2 202 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 TREM2Q9NZC2 230 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 PIPOXQ9P0Z9 390 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 MGAT4CQ9UBM8 478 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 ZNF69Q9UC07 566 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 Q9UFV3 132 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 ZNF222Q9UK12 451 aa7.13□□□□□ -1.27
RNF4-220ENST00000513578 CHD3Q12873 2000 aaKnown RBP7.13□□□□□ -1.27
RNF4-220ENST00000513578 DSPP15924 2871 aaKnown RBP7.12□□□□□ -1.27
RNF4-220ENST00000513578 IGLV3-9A0A075B6K5 115 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 IGKV1D-8A0A087WSZ0 117 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 F8VVB4 439 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 F8VWA3 439 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 OR7C1O76099 320 aaPredicted RBP7.12□□□□□ -1.27
RNF4-220ENST00000513578 IGHV3-13P01766 116 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 CRYAAP02489 173 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 FAM87AP0C7U9 286 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 GSTT2P0CG29 244 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 SFTPCP11686 197 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 MDH2P40926 338 aaKnown RBP7.12□□□□□ -1.27
RNF4-220ENST00000513578 UCP3P55916 312 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 ERVS71-1P61550 626 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 TSPAN5P62079 268 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 RPS23P62266 143 aaKnown RBP7.12□□□□□ -1.27
RNF4-220ENST00000513578 DHRS2Q13268 280 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 RBM39Q14498 530 aaKnown RBP7.12□□□□□ -1.27
RNF4-220ENST00000513578 OR8G1Q15617 311 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 ALKBH6Q3KRA9 238 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 C4orf46Q504U0 113 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 TMEM128Q5BJH2 165 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 SPIN3Q5JUX0 258 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 SPATA46Q5T0L3 261 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 AADACL3Q5VUY0 350 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 Q6P435 159 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 ZNF880Q6PDB4 577 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 NLRC3Q7RTR2 1065 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 GAPTQ8N292 157 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 POC1AQ8NBT0 407 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 SCCPDHQ8NBX0 429 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 BHLHE23Q8NDY6 225 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 OR13G1Q8NGZ3 307 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 MITD1Q8WV92 249 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 CCDC120Q96HB5 630 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 NRIP2Q9BQI9 281 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 GON7Q9BXV9 100 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 OR51B6Q9H340 312 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 FN3KRPQ9HA64 309 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 HES4Q9HCC6 221 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 NECAP2Q9NVZ3 263 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 EHFQ9NZC4 300 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 ZNF230Q9UIE0 474 aaPredicted RBP7.12□□□□□ -1.27
RNF4-220ENST00000513578 PRR14LQ5THK1 2151 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 ITPR3Q14573 2671 aa7.12□□□□□ -1.27
RNF4-220ENST00000513578 C9orf170A2RU37 121 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 DBX1A6NMT0 343 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 MCRIP1C9JLW8 97 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 G3V3Q6 166 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 C16orf97H3BN30 126 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 H7C1Q1 480 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 MLNRO43193 412 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 DUS4LO95620 317 aaKnown RBP7.11□□□□□ -1.27
RNF4-220ENST00000513578 CSN2P05814 226 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 CTSDP07339 412 aaPredicted RBP7.11□□□□□ -1.27
RNF4-220ENST00000513578 CTXN2P0C2S0 81 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 PPP3CBP16298 524 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 PRKACAP17612 351 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 LMO1P25800 156 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 CFHR2P36980 270 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 CD200P41217 278 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 NKX2-5P52952 324 aaPredicted RBP7.11□□□□□ -1.27
RNF4-220ENST00000513578 ARPC4P59998 168 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 SEC61A1P61619 476 aaKnown RBP7.11□□□□□ -1.27
RNF4-220ENST00000513578 ZNF154Q13106 437 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 ZNF146Q15072 292 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 LAMTOR1Q6IAA8 161 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 RGS7BPQ6MZT1 257 aaPredicted RBP7.11□□□□□ -1.27
RNF4-220ENST00000513578 C11orf53Q8IXP5 236 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 RELL2Q8NC24 303 aaPredicted RBP7.11□□□□□ -1.27
RNF4-220ENST00000513578 ST6GALNAC3Q8NDV1 305 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 NUP37Q8NFH4 326 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 OR52B4Q8NGK2 314 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 OR10Z1Q8NGY1 313 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 MARCH1Q8TCQ1 289 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 CAPSLQ8WWF8 208 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 CYYR1Q96J86 154 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 RTBDNQ9BSG5 229 aaPredicted RBP7.11□□□□□ -1.27
RNF4-220ENST00000513578 HDHD3Q9BSH5 251 aaPredicted RBP7.11□□□□□ -1.27
RNF4-220ENST00000513578 C1QTNF6Q9BXI9 259 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 C5orf66Q9H5L9 145 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 SLA2Q9H6Q3 261 aa7.11□□□□□ -1.27
RNF4-220ENST00000513578 ZNF442Q9H7R0 627 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms