RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 IL13RA2Q14627 380 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 PRTGQ2VWP7 1150 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 TMEM255AQ5JRV8 349 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 MISPQ8IVT2 679 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 OR2C3Q8N628 320 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 WFDC5Q8TCV5 224 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 APOBEC4Q8WW27 367 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 CDC42EP3Q9UKI2 254 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 EVPLQ92817 2033 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 ADAP1O75689 374 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 CA1P00915 261 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 APCSP02743 223 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 CXCL10P02778 98 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 MRPL54Q6P161 138 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 D2HGDHQ8N465 521 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 GJC3Q8NFK1 279 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 OR1L4Q8NGR5 311 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 C11orf68Q9H3H3 251 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 PSG11Q9UQ72 335 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 TNS1Q9HBL0 1735 aaKnown RBP7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 IGHV3-64DA0A0J9YX35 117 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 F12P00748 615 aaPredicted RBP7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 MT-ND6P03923 174 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 FPR2P25090 351 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 PCBP3P57721 371 aaKnown RBP7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 SMAGPQ0VAQ4 97 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 INSL4Q14641 139 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 IZUMO4Q1ZYL8 232 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 KHDC3LQ587J8 217 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 FCRL6Q6DN72 434 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 TMEM108Q6UXF1 575 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 MAMSTRQ6ZN01 415 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 CALHM1Q8IU99 346 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 OR8B3Q8NGG8 313 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 CHRNA10Q9GZZ6 450 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 MIXL1Q9H2W2 232 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 NAA60Q9H7X0 242 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 TMEM140Q9NV12 185 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 SIRT5Q9NXA8 310 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 CCL26Q9Y258 94 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 HPP00738 406 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 FGF9P31371 208 aaPredicted RBP7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 SELENOPP49908 381 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 H1FNTQ75WM6 255 aaPredicted RBP7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 DOK3Q7L591 496 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 PMCHL2Q9BQD1 86 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 TMEM70Q9BUB7 260 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 FGF20Q9NP95 211 aaPredicted RBP7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 PROCRQ9UNN8 238 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 MMACHCQ9Y4U1 282 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 ETHE1O95571 254 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 IGHV3-9P01782 118 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 NMBP08949 121 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 PPP1R1AQ13522 171 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 LDLRAD2Q5SZI1 272 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 FHL5Q5TD97 284 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 MYOZ3Q8TDC0 251 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 ALG14Q96F25 216 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 SIGLEC11Q96RL6 698 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 GABRG3Q99928 467 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 ZNF346Q9UL40 294 aaKnown RBP7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 TARM1B6A8C7 271 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 PRKNO60260 465 aaPredicted RBP7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 IGF2P01344 180 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 METAP1P53582 386 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 LIM2P55344 173 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 RIPPLY3P57055 190 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 CKS1BP61024 79 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 C1orf185Q5T7R7 199 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 TRAT1Q6PIZ9 186 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 OR10W1Q8NGF6 305 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 MS4A6EQ96DS6 147 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 NDUFAF3Q9BU61 184 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 CFHR5Q9BXR6 569 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 PARLQ9H300 379 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 SLC25A22Q9H936 323 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 ASCL3Q9NQ33 180 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 MTFP1Q9UDX5 166 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 DUSP13Q9UII6 198 aa7.79□□□□□ -1.16
LIMCH1-218ENST00000513024 IGLV3-10A0A075B6K4 115 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 SMPD2O60906 423 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 SFT2D2O95562 160 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 HLA-GP17693 338 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 DNLZQ5SXM8 178 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 OR10S1Q8NGN2 331 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 OR10G4Q8NGN3 311 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 OR10G9Q8NGN4 311 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 OR10G7Q8NGN6 311 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 OR1N2Q8NGR9 330 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 SLAMF6Q96DU3 332 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 SLC6A13Q9NSD5 602 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 RBBP6Q7Z6E9 1792 aaKnown RBP7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 MPTX1A8MV57 137 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 H7C2G1 150 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 GFYI3L273 518 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 K7ESM1 405 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 M0QZ24 198 aa7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 TIMM8AO60220 97 aaPredicted RBP7.78□□□□□ -1.16
LIMCH1-218ENST00000513024 EIF1BO60739 113 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms