RNA–Protein interactions for RNA: ENST00000512820.5

LIMCH1-216, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-216ENST00000512820 IGFBP3P17936 291 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 CD200P41217 278 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 PRDX4Q13162 271 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 SLC25A47Q6Q0C1 308 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 OR13D1Q8NGV5 346 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 UBALD1Q8TB05 177 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 HLA-CQ95604 372 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 NUDT16L1Q9BRJ7 211 aaKnown RBP7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 FAM234AQ9H0X4 552 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 B3GAT1Q9P2W7 334 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 POLDIP2Q9Y2S7 368 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 IGKV1D-43A0A0B4J1Z2 117 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 A0A1W2PPQ1 181 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 PDGFBP01127 241 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 MELTFP08582 738 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 PTGER4P35408 488 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 DHRS7BQ6IAN0 325 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 SLC35G3Q8N808 338 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 FAM210BQ96KR6 192 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 RAB40CQ96S21 281 aa7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 ACTR3CQ9C0K3 210 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 UBE2ZQ9H832 354 aaPredicted RBP7.37□□□□□ -1.23
LIMCH1-216ENST00000512820 SH2D1BO14796 132 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 PHOX2AO14813 284 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 TIMM8AO60220 97 aaPredicted RBP7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 ACTL6AO96019 429 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 HLA-DRB3P79483 266 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 PMP22Q01453 160 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 IGSF11Q5DX21 431 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 POC1AQ8NBT0 407 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 SLC25A28Q96A46 364 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 ADGRG7Q96K78 797 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 OR51I2Q9H344 312 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 A0A0U1RQV5 110 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 TOX3O15405 576 aaPredicted RBP7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 CHST1O43916 411 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 KITLGP21583 273 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 RAC3P60763 192 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 C6orf15Q6UXA7 325 aaPredicted RBP7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 UBAC2Q8NBM4 344 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 OR10D3Q8NH80 312 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 HEATR5BQ9P2D3 2071 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 UBE2L5PA0A1B0GUS4 154 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 H3BQ15 152 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 CDS2O95674 445 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 MBPP02686 304 aaPredicted RBP7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 FCGR3AP08637 254 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 ZNF735P0CB33 412 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 ACKR3P25106 362 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 ATP6V0CP27449 155 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 IL24Q13007 206 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 HLA-BQ31612 363 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 PLAC9Q5JTB6 97 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 DHRS11Q6UWP2 260 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 GAPTQ8N292 157 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 OR11L1Q8NGX0 322 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 ERGIC1Q969X5 290 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 PINX1Q96BK5 328 aaKnown RBP7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 UHRF2Q96PU4 802 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 HIPK2Q9H2X6 1198 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 CACNG5Q9UF02 275 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 METTL15P1P0C7V9 234 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 CCL2P13500 99 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 COX5AP20674 150 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 VDAC1P21796 283 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 SCN5AQ14524 2016 aa7.36□□□□□ -1.23
LIMCH1-216ENST00000512820 MASP2O00187 686 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 SPINT2O43291 252 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 CYTIPO60759 359 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 MBP02144 154 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 CCL3P10147 92 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 PRF1P14222 555 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 DLK1P80370 383 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 MZT1Q08AG7 82 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 ZNF154Q13106 437 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 EDDM3AQ14507 147 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 SPATA46Q5T0L3 261 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 TMEM211Q6ICI0 200 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 RAB9BQ9NP90 201 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 CLEC1BQ9P126 229 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 CARHSP1Q9Y2V2 147 aaKnown RBP7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 UNC13CQ8NB66 2214 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 A0A1W2PNV4 684 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 TRDCB7Z8K6 153 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 HMGB3O15347 200 aaKnown RBP7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 CST2P09228 141 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 OR8U8P0C7N1 319 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 FGF8P55075 233 aaPredicted RBP7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 FNDC7Q5VTL7 733 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 AUP1Q9Y679 476 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 CRYM-AS1A6NIL9 109 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 SEC14L6B5MCN3 397 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 ZNF708P17019 499 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 SRD5A2P31213 254 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 ENDOGQ14249 297 aaKnown RBP7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 IL11RAQ14626 422 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 OR8G1Q15617 311 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 SF3B5Q9BWJ5 86 aaKnown RBP7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 RTN4RQ9BZR6 473 aa7.35□□□□□ -1.23
LIMCH1-216ENST00000512820 CCL28Q9NRJ3 127 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms