RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 JAM3Q9BX67 310 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 NAA50Q9GZZ1 169 aaKnown RBP7.22□□□□□ -1.25
NUP54-211ENST00000512151 WDR13Q9H1Z4 485 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 ZMAT4Q9H898 229 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 ISG20L2Q9H9L3 353 aaKnown RBP7.22□□□□□ -1.25
NUP54-211ENST00000512151 C19orf12Q9NSK7 152 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 ERVK13-1Q9NX77 482 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 CNOT2Q9NZN8 540 aaKnown RBP7.22□□□□□ -1.25
NUP54-211ENST00000512151 SLC25A10Q9UBX3 287 aaPredicted RBP7.22□□□□□ -1.25
NUP54-211ENST00000512151 MRM2Q9UI43 246 aaKnown RBP7.22□□□□□ -1.25
NUP54-211ENST00000512151 ATPIF1Q9UII2 106 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 ZNF391Q9UJN7 358 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 LAMP5Q9UJQ1 280 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 DIMT1Q9UNQ2 313 aaKnown RBP7.22□□□□□ -1.25
NUP54-211ENST00000512151 ZNF256Q9Y2P7 627 aaPredicted RBP7.22□□□□□ -1.25
NUP54-211ENST00000512151 KMT2AQ03164 3969 aa7.22□□□□□ -1.25
NUP54-211ENST00000512151 DAPL1A0PJW8 107 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 EFCAB10A6NFE3 127 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 ZNF878C9JN71 531 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 SRSF10O75494 262 aaKnown RBP7.21□□□□□ -1.25
NUP54-211ENST00000512151 FADS2O95864 444 aaKnown RBP7.21□□□□□ -1.25
NUP54-211ENST00000512151 MT-ND2P03891 347 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 OPRL1P41146 370 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 OR12D2P58182 307 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 ROM1Q03395 351 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 GALEQ14376 348 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 IRF3Q14653 427 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 SSX2Q16385 188 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 TP53I3Q53FA7 332 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 OR2G6Q5TZ20 316 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 UBE2UQ5VVX9 321 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 ZNF322Q6U7Q0 402 aaPredicted RBP7.21□□□□□ -1.25
NUP54-211ENST00000512151 ZNF788Q6ZQV5 615 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 SLC16A12Q6ZSM3 486 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 PGAP1Q75T13 922 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 EGFL6Q8IUX8 553 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 FAM185AQ8N0U4 392 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 STX19Q8N4C7 294 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 ACBD7Q8N6N7 88 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 GATAD1Q8WUU5 269 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 FCGR1BQ92637 280 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 MNTQ99583 582 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 COQ7Q99807 217 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 ATF6BQ99941 703 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 COPS4Q9BT78 406 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 FUNDC2Q9BWH2 189 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 CCDC90BQ9GZT6 254 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 SLC22A4Q9H015 551 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 ABCB10Q9NRK6 738 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 ENPP5Q9UJA9 477 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 PITPNC1Q9UKF7 332 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 LRP12Q9Y561 859 aa7.21□□□□□ -1.25
NUP54-211ENST00000512151 E9PI62 339 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 J3QLW9 94 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 INMTO95050 263 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 GABARAPO95166 117 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 LALBAP00709 142 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 H2BFMP0C1H6 154 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ZNF19P17023 458 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 OTX1P32242 354 aaPredicted RBP7.2□□□□□ -1.26
NUP54-211ENST00000512151 PRKXP51817 358 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 LGALS4P56470 323 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 CAV3P56539 151 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 RAB25P57735 213 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ZNF92Q03936 586 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 C9orf66Q5T8R8 295 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ZNF782Q6ZMW2 699 aaPredicted RBP7.2□□□□□ -1.26
NUP54-211ENST00000512151 LINC00299Q6ZSB3 139 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 PRSS45Q7RTY3 260 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ZNF329Q86UD4 541 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ZNF679Q8IYX0 411 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ZNF485Q8NCK3 441 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 OR2AE1Q8NHA4 323 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 YIPF6Q96EC8 236 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 KCNJ15Q99712 375 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ALG8Q9BVK2 526 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 HDHD2Q9H0R4 259 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 PPP1R3EQ9H7J1 279 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 HEXA-AS1Q9H8Q6 139 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ACOT13Q9NPJ3 140 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ZNF319Q9P2F9 582 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 EXOSC1Q9Y3B2 195 aaKnown RBP7.2□□□□□ -1.26
NUP54-211ENST00000512151 TMEM14AQ9Y6G1 99 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 IRGMA1A4Y4 181 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 METTL15A6NJ78 407 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 FAM90A22PA8MWA6 464 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 NUDT19A8MXV4 375 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ODF3BA8MYP8 253 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 F5H5K5 113 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 SIGLEC5O15389 551 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 LY86O95711 162 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 LCATP04180 440 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 AMY1AP04745 511 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 AMY2AP04746 511 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 SLC2A1P11166 492 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 MAP2K4P45985 399 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 CX3CR1P49238 355 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 DYNLT3P51808 116 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ACTC1P68032 377 aa7.2□□□□□ -1.26
NUP54-211ENST00000512151 ACTA1P68133 377 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms