RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 IZUMO2Q6UXV1 221 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 OVCH2Q7RTZ1 564 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 RTN4RL2Q86UN3 420 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 ZNF573Q86YE8 665 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 EGFL6Q8IUX8 553 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 DHRSXQ8N5I4 330 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 HRASLS5Q96KN8 279 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 NOL4LQ96MY1 436 aaPredicted RBP9.11□□□□□ -0.95
RNF4-216ENST00000511859 OR51V1Q9H2C8 321 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 VCX3BQ9H321 246 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 NIPAL2Q9H841 368 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 HES4Q9HCC6 221 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 IMPAD1Q9NX62 359 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 SLC22A13Q9Y226 551 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 POLDIP2Q9Y2S7 368 aa9.11□□□□□ -0.95
RNF4-216ENST00000511859 MEX3AA1L020 520 aaKnown RBP9.1□□□□□ -0.95
RNF4-216ENST00000511859 SERPINE3A8MV23 424 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 FRMD6-AS1P0C7T7 363 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 SPI1P17947 270 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 CEACAM3P40198 252 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 VHLP40337 213 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 CDX1P47902 265 aaPredicted RBP9.1□□□□□ -0.95
RNF4-216ENST00000511859 CDC42P60953 191 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 RPS7P62081 194 aaKnown RBP9.1□□□□□ -0.95
RNF4-216ENST00000511859 FAM27D1Q5T7N8 215 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 OR52W1Q6IF63 320 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 LCNL1Q6ZST4 164 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 MOB3CQ70IA8 216 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 SHFQ7M4L6 423 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 THNSL2Q86YJ6 484 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 ABHD12Q8N2K0 398 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 ASCC1Q8N9N2 400 aaKnown RBP9.1□□□□□ -0.95
RNF4-216ENST00000511859 OR6K6Q8NGW6 343 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 TMEM163Q8TC26 289 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 ZNF488Q96MN9 340 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 RDH12Q96NR8 316 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 ADI1Q9BV57 179 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 PRRG3Q9BZD7 231 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 NMNAT2Q9BZQ4 307 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 C8orf4Q9NR00 106 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 MOB4Q9Y3A3 225 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 LINC00312Q9Y6C7 94 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 HSPE1-MOB4S4R3N1 261 aa9.1□□□□□ -0.95
RNF4-216ENST00000511859 ZNF737O75373 536 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 GNAO1P09471 354 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 ATP6V1B1P15313 513 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 CAPGP40121 348 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 MNDAP41218 407 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 HAAOP46952 286 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 ADARB1P78563 741 aaKnown RBP9.09□□□□□ -0.95
RNF4-216ENST00000511859 APOFQ13790 326 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 CCDC144NLQ6NUI1 221 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 FOXRED2Q8IWF2 684 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 OR8H2Q8N162 312 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 OR6N2Q8NGY6 317 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 SNX22Q96L94 193 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 INTS14Q96SY0 518 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 TM2D3Q9BRN9 247 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 PLECQ15149 4684 aaKnown RBP9.09□□□□□ -0.95
RNF4-216ENST00000511859 TNCP24821 2201 aa9.09□□□□□ -0.95
RNF4-216ENST00000511859 OOSP1A8MZH6 123 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 J3QT63 122 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 CCRL2O00421 344 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 SLC16A6O15403 523 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 IGHG2P01859 326 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 RIPPLY1Q0D2K3 151 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 PNLIPRP3Q17RR3 467 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 DEFB136Q30KP8 78 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 LINC01590Q5TEZ4 76 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 TTC23Q5W5X9 447 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 PLCXD3Q63HM9 321 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 TCF23Q7RTU1 214 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 KRT77Q7Z794 578 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 ERI1Q8IV48 349 aaKnown RBP9.08□□□□□ -0.96
RNF4-216ENST00000511859 ENTHD1Q8IYW4 607 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 STPG2Q8N412 459 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 DRAM1Q8N682 238 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 OR8B12Q8NGG6 310 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 GON7Q9BXV9 100 aa9.08□□□□□ -0.96
RNF4-216ENST00000511859 H2AFY2Q9P0M6 372 aaPredicted RBP9.08□□□□□ -0.96
RNF4-216ENST00000511859 ALMS1Q8TCU4 4167 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 RYR1P21817 5038 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 PCLOQ9Y6V0 5065 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 A0A0U1RQV5 110 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 FAM90A18PA6NE21 464 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 FAM90A16PA6NEW6 464 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 FAM90A20PA6NIJ5 464 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 ACOD1A6NK06 481 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 FAM90A9PA6NNJ1 464 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 FAM90A12PA8MX19 464 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 FAM90A5PA8MXJ8 464 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 PSMD9O00233 223 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 LDLRAD4O15165 306 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 FGF16O43320 207 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 ENTPD6O75354 484 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 NRASP01111 189 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 IGLV1-47P01700 117 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 MRPL3P09001 348 aaKnown RBP9.07□□□□□ -0.96
RNF4-216ENST00000511859 FAM90A15PP0C7V4 464 aa9.07□□□□□ -0.96
RNF4-216ENST00000511859 FAM90A13PP0C7W8 464 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms