RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 CLPSP04118 112 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 ALDOBP05062 364 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 SERPINA6P08185 405 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 OR8U8P0C7N1 319 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 CD1BP29016 333 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 BMI1P35226 326 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 HPCAL1P37235 193 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 ASIPP42127 132 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 CDKN1BP46527 198 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 EIF3EP60228 445 aaKnown RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 RPS23P62266 143 aaKnown RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 MERTKQ12866 999 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 MAD2L1BPQ15013 274 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 NNATQ16517 81 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 GGTA1PQ4G0N0 100 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 TMEM155Q4W5P6 130 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 FBXO48Q5FWF7 155 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 C6orf89Q6UWU4 347 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 TMEM107Q6UX40 140 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 EIF3MQ7L2H7 374 aaKnown RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 GDPD3Q7L5L3 318 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 H2BFWTQ7Z2G1 175 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 TPRA1Q86W33 373 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 PHF13Q86YI8 300 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 EGFL6Q8IUX8 553 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 ST13P4Q8IZP2 240 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 MTURNQ8N3F0 131 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 Q8N7P7 452 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 DRAXINQ8NBI3 349 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 BPIFCQ8NFQ6 507 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 OR10H4Q8NGA5 316 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 OR4X2Q8NGF9 303 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 OR51G2Q8NGK0 314 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 OR1F12Q8NHA8 337 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 LKAAEAR1Q8TD35 194 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 CCL17Q92583 94 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 NEIL2Q969S2 332 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 PPWD1Q96BP3 646 aaKnown RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 PELI1Q96FA3 418 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 RNF126Q9BV68 326 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 DNTTIP1Q9H147 329 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 NXF5Q9H1B4 397 aaKnown RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 CHRAC1Q9NRG0 131 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 SDHAF3Q9NRP4 125 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 EMC3Q9P0I2 261 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 DCDC2Q9UHG0 476 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 IKZF2Q9UKS7 526 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 COMMD3-BMI1R4GMX3 469 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 PKD1P98161 4303 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 ARHGAP32A7KAX9 2087 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 A0A0G2JN53 185 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 A0A0J9YW62 118 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 A0A0U1RQV1 116 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 KIR2DS1A0A191URI9 304 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 LINC00854A0A1B0GVQ3 168 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 GJE1A6NN92 205 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 POLR3GO15318 223 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 ENSAO43768 121 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 PSIP1O75475 530 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 IGHV3-48P01763 117 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 OR8G3PP0DMU2 310 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 PRKACAP17612 351 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 ELK1P19419 428 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 GTF2E2P29084 291 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 CFHR2P36980 270 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 P2RY1P47900 373 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 RAB9AP51151 201 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 UBE2NP61088 152 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 ZNF45Q02386 682 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 ZNF763Q0D2J5 394 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 STK38Q15208 465 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 EXOC3L4Q17RC7 722 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 FAM27D1Q5T7N8 215 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 C9orf135Q5VTT2 229 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 TTC19Q6DKK2 380 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 PTRHD1Q6GMV3 140 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 RNASEKQ6P5S7 137 aaKnown RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 KCNIP4Q6PIL6 250 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 DGAT2L6Q6ZPD8 337 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 HSD17B13Q7Z5P4 300 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 TMEM179BQ7Z7N9 219 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 SKA3Q8IX90 412 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 IQCF2Q8IXL9 164 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 KATNAL2Q8IYT4 538 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 MICU2Q8IYU8 434 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 KRT222Q8N1A0 295 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 Q8N2B8 174 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 GTPBP8Q8N3Z3 284 aaPredicted RBP2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 BBS1Q8NFJ9 593 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 SLC7A13Q8TCU3 470 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 MAIP1Q8WWC4 291 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 MYDGFQ969H8 173 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 SLC38A4Q969I6 547 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 LRRC39Q96DD0 335 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 CCDC126Q96EE4 140 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 PLEKHA8Q96JA3 519 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 MS4A14Q96JA4 679 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 GPR21Q99679 349 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 BPIFA3Q9BQP9 254 aa2.39□□□□□ -2.03
TOPBP1-208ENST00000511439 CENPKQ9BS16 269 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms