RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ADAP1O75689 374 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 OR7C1O76099 320 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 SPDEFO95238 335 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 PTBP3O95758 552 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TBX6O95947 436 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MOSP00540 346 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 SCTP09683 121 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A15PP0C7V4 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A13PP0C7W8 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A14PP0C7W9 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FAM90A24PP0C7X0 464 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 VSIG8P0DPA2 414 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 PIPP12273 146 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CTLA4P16410 223 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CDAP32320 146 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 YAP1P46937 504 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 HOXA1P49639 335 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 P2RX3P56373 397 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 IL24Q13007 206 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 GUCA2BQ16661 112 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 EXOSC6Q5RKV6 272 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 PRAMEF6Q5VXH4 476 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TEX36Q5VZQ5 186 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MZT2BQ6NZ67 158 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FOXL2NBQ6ZUU3 175 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CDH26Q8IXH8 852 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 DEFB107AQ8IZN7 70 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MFSD4AQ8N468 514 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 JAGN1Q8N5M9 183 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 KCNG3Q8TAE7 436 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CD300LFQ8TDQ1 290 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM255BQ8WV15 326 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 HTRA1Q92743 480 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 DVL3Q92997 716 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MAL2Q969L2 176 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 YIPF5Q969M3 257 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 GALMQ96C23 342 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 SDSLQ96GA7 329 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 SPIN2AQ99865 258 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 SPIN2BQ9BPZ2 258 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ZCCHC4Q9H5U6 513 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF256Q9Y2P7 627 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 GMPPBQ9Y5P6 360 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 PIEZO2Q9H5I5 2752 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 LOC105371267A0A1B0GV96 52 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 A0A1W2PRX2 142 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TVP23AA6NH52 213 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF785A8K8V0 405 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 VGLL3A8MV65 326 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 SAP30O75446 220 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 RPP14O95059 124 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 PATE4P0C8F1 98 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MDKP21741 143 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 OMGP23515 440 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CD1BP29016 333 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 PYCR1P32322 319 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 IER3P46695 156 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 NPBWR2P48146 333 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 GNGT1P63211 74 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF616Q08AN1 781 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 GK2Q14410 553 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MMDQ15546 238 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 WDR38Q5JTN6 314 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 PHYHD1Q5SRE7 291 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 LPCAT3Q6P1A2 487 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 BRD3OSQ6XYD6 125 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 C8orf86Q6ZUL3 223 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 LYPD6Q86Y78 171 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 LAX1Q8IWV1 398 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 OR5AK2Q8NH90 309 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ARL11Q969Q4 196 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 NABP1Q96AH0 204 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 SEH1LQ96EE3 360 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 MOGAT1Q96PD6 335 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 NMNAT3Q96T66 252 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 C1QTNF4Q9BXJ3 329 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TUBB1Q9H4B7 451 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 TECRQ9NZ01 308 aaKnown RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 VAPAQ9P0L0 249 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF107Q9UII5 783 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 EMCNQ9ULC0 261 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 FOXA2Q9Y261 457 aaPredicted RBP2.36□□□□□ -2.03
CLOCK-209ENST00000511124 CCL27Q9Y4X3 112 aa2.36□□□□□ -2.03
CLOCK-209ENST00000511124 WNK2Q9Y3S1 2297 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 RFPL4AA6NLU0 287 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 RFPL4AL1F8VTS6 287 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 DNASE2O00115 360 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 RER1O15258 196 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ORC5O43913 435 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 SCAF4O95104 1147 aaKnown RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 SHBGP04278 402 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 CCL2P13500 99 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 LOXP28300 417 aaPredicted RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 OMPP47874 163 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 OR3A3P47888 321 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 GLIPR1P48060 266 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 INPP1P49441 399 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 GPM6AP51674 278 aa2.35□□□□□ -2.03
CLOCK-209ENST00000511124 RPP30P78346 268 aaKnown RBP2.35□□□□□ -2.03
CLOCK-209ENST00000511124 ADARB1P78563 741 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms