RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 MAP2K4P45985 399 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 INSL4Q14641 139 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 ZNF146Q15072 292 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 SPHARQ15513 63 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 MED22Q15528 200 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 GRK1Q15835 563 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 SPIN3Q5JUX0 258 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 OR8H2Q8N162 312 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 PIP4P2Q8N4L2 257 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 TPRX1Q8N7U7 411 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 TNFRSF14Q92956 283 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 DMRTB1Q96MA1 342 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 DERL3Q96Q80 235 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 METTL8Q9H825 291 aaKnown RBP11.45□□□□□ -0.58
DDX41-212ENST00000511040 CKLFQ9UBR5 152 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 ING4Q9UNL4 249 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 PIN1P1O15428 100 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 HOXA3O43365 443 aaPredicted RBP11.44□□□□□ -0.58
DDX41-212ENST00000511040 ALDOBP05062 364 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 HSMCR30P0CW71 290 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 ZNF44P15621 663 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 IGFBP3P17936 291 aaPredicted RBP11.44□□□□□ -0.58
DDX41-212ENST00000511040 PRTN3P24158 256 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 COX7A1P24310 79 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 ZNF93P35789 620 aaPredicted RBP11.44□□□□□ -0.58
DDX41-212ENST00000511040 TGFBR2P37173 567 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 PTGFRP43088 359 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 OR3A1P47881 315 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 BPIFB3P59826 476 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 ACTG1P63261 375 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 RSU1Q15404 277 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 SLC9A3R2Q15599 337 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 HCP5Q6MZN7 132 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 C1orf122Q6ZSJ8 110 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 PXT1Q8NFP0 134 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 OR5D13Q8NGL4 314 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 SPATA3Q8NHX4 192 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 FAM216AQ8WUB2 273 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 CPNE2Q96FN4 548 aaPredicted RBP11.44□□□□□ -0.58
DDX41-212ENST00000511040 ZNF184Q99676 751 aaPredicted RBP11.44□□□□□ -0.58
DDX41-212ENST00000511040 TMED9Q9BVK6 235 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 PPA2Q9H2U2 334 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 NOX4Q9NPH5 578 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 ING3Q9NXR8 418 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 RAB26Q9ULW5 256 aa11.44□□□□□ -0.58
DDX41-212ENST00000511040 HSPB6O14558 160 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 DEGS1O15121 323 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 NPFFO15130 113 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 HTR3BO95264 441 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 MAS1P04201 325 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 CD1AP06126 327 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 EEF1B2P24534 225 aaKnown RBP11.43□□□□□ -0.58
DDX41-212ENST00000511040 MTNR1BP49286 362 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 DLX6P56179 175 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 BDH1Q02338 343 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 GUCA2AQ02747 115 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 ACSM1Q08AH1 577 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 PIGYQ3MUY2 71 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 FAM27D1Q5T7N8 215 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 NCR3LG1Q68D85 454 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 Q6P435 159 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 METAP1DQ6UB28 335 aaPredicted RBP11.43□□□□□ -0.58
DDX41-212ENST00000511040 ZNF782Q6ZMW2 699 aaPredicted RBP11.43□□□□□ -0.58
DDX41-212ENST00000511040 TCF23Q7RTU1 214 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 JAGN1Q8N5M9 183 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 C11orf42Q8N5U0 333 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 ZFAND2BQ8WV99 257 aa11.43□□□□□ -0.58
DDX41-212ENST00000511040 TAF15Q92804 592 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDX41-212ENST00000511040 SEBOXQ9HB31 216 aaPredicted RBP11.43□□□□□ -0.58
DDX41-212ENST00000511040 A0A0G2JK05 382 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 A0A1W2PPH5 198 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 SLC33A1O00400 549 aaPredicted RBP11.42□□□□□ -0.58
DDX41-212ENST00000511040 MGST3O14880 152 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 GPX5O75715 221 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 MELTFP08582 738 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 FSTP19883 344 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 ACSM3Q53FZ2 586 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 RBM48Q5RL73 367 aaKnown RBP11.42□□□□□ -0.58
DDX41-212ENST00000511040 LIPKQ5VXJ0 399 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 ELP2Q6IA86 826 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 Q6YL49 198 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 TBC1D15Q8TC07 691 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 C17orf50Q8WW18 174 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 TMEM203Q969S6 136 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 MUL1Q969V5 352 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 RHOFQ9HBH0 211 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 ZNF581Q9P0T4 197 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 FAM96BQ9Y3D0 163 aa11.42□□□□□ -0.58
DDX41-212ENST00000511040 MEIOCA2RUB1 952 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 ZNF728P0DKX0 622 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 SERPINA2P20848 420 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 SAA4P35542 130 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 BMXP51813 675 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 UBE2E1P51965 193 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 P2RX3P56373 397 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 AESQ08117 197 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 ATXN7L3Q14CW9 347 aaPredicted RBP11.41□□□□□ -0.58
DDX41-212ENST00000511040 SLC22A6Q4U2R8 563 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 ASCL4Q6XD76 172 aa11.41□□□□□ -0.58
DDX41-212ENST00000511040 PRSS48Q7RTY5 328 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms