RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 LIMS4P0CW20 117 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 IGFBP3P17936 291 aaPredicted RBP2.81□□□□□ -1.96
NUP54-209ENST00000510569 PSMA1P25786 263 aaKnown RBP2.81□□□□□ -1.96
NUP54-209ENST00000510569 ELK4P28324 431 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 ADORA1P30542 326 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 TTPAP49638 278 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 NDUFA8P51970 172 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 CRYBA4P53673 196 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 OR10A3P58181 314 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 TAS2R31P59538 309 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 ZNF45Q02386 682 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 PRPSAP1Q14558 356 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 PSMD5Q16401 504 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 CEACAM21Q3KPI0 293 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 UFSP1Q6NVU6 142 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 FAM19A1Q7Z5A9 133 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 TMEM135Q86UB9 458 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 THOC6Q86W42 341 aaKnown RBP2.81□□□□□ -1.96
NUP54-209ENST00000510569 NIT1Q86X76 327 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 LINC01561Q8N1V8 128 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 OR2L13Q8N349 312 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 STX19Q8N4C7 294 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 CLDN22Q8N7P3 220 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 ZNF740Q8NDX6 193 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 MDS2Q8NDY4 140 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 OR11H1Q8NG94 326 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 OR11H2Q8NH07 326 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 C16orf78Q8WTQ4 265 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 KCTD4Q8WVF5 259 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 RAB8BQ92930 207 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 MARC2Q969Z3 335 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 TADA1Q96BN2 335 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 MED8Q96G25 268 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 RNF2Q99496 336 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 PHB2Q99623 299 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 GPR22Q99680 433 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 NUDT9Q9BW91 350 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 TM2D1Q9BX74 207 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 NXF2Q9GZY0 626 aaKnown RBP2.81□□□□□ -1.96
NUP54-209ENST00000510569 REEP4Q9H6H4 257 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 EXOSC3Q9NQT5 275 aaKnown RBP2.81□□□□□ -1.96
NUP54-209ENST00000510569 AGPAT4Q9NRZ5 378 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 GLTPQ9NZD2 209 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 RWDD2AQ9UIY3 292 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 LSM7Q9UK45 103 aaKnown RBP2.81□□□□□ -1.96
NUP54-209ENST00000510569 SAMD4AQ9UPU9 718 aaKnown RBP2.81□□□□□ -1.96
NUP54-209ENST00000510569 ASF1AQ9Y294 204 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 ASTN1O14525 1302 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 FRMPD3Q5JV73 1810 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 FOCADQ5VW36 1801 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 ARFGEF1Q9Y6D6 1849 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 ZNF816-ZNF321PA0A0X1KG74 233 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 SMIM28A0A1B0GU29 152 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 METTL15A6NJ78 407 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 OR5B21A6NL26 309 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 C11orf98E9PRG8 122 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 F5H5T6 163 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 MRPS12O15235 138 aaKnown RBP2.8□□□□□ -1.96
NUP54-209ENST00000510569 TCAPO15273 167 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 ENTPD6O75354 484 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 SUPT3HO75486 399 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 CNIH1O95406 144 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 CATP04040 527 aaKnown RBP2.8□□□□□ -1.96
NUP54-209ENST00000510569 UGT2B7P16662 529 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 ALOX5APP20292 161 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 PVALBP20472 110 aaPredicted RBP2.8□□□□□ -1.96
NUP54-209ENST00000510569 COX5AP20674 150 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 F2RP25116 425 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 HTR1DP28221 377 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 HTR1EP28566 365 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 FGF9P31371 208 aaPredicted RBP2.8□□□□□ -1.96
NUP54-209ENST00000510569 NUDT1P36639 197 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 CEACAM6P40199 344 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 BTDP43251 543 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 SULT1A1P50225 295 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 SULT1A2P50226 295 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 RAB7AP51149 207 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 SSR4P51571 173 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 CLDN12P56749 244 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 CDC42P60953 191 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 ESRRGP62508 458 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 RPL32P62910 135 aaKnown RBP2.8□□□□□ -1.96
NUP54-209ENST00000510569 CD164Q04900 197 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 SLC39A6Q13433 755 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 LAGE3Q14657 143 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 LRRC36Q1X8D7 754 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 TMEM52BQ4KMG9 183 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 OR10J3Q5JRS4 329 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 CPTPQ5TA50 214 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 ELP2Q6IA86 826 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 ZFP1Q6P2D0 407 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 STAC2Q6ZMT1 411 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 FAM19A5Q7Z5A7 132 aaPredicted RBP2.8□□□□□ -1.96
NUP54-209ENST00000510569 SLC30A8Q8IWU4 369 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 CA13Q8N1Q1 262 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 PRELID2Q8N945 189 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 OR4F17Q8NGA8 305 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 OR10A6Q8NH74 314 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 HAVCR2Q8TDQ0 301 aa2.8□□□□□ -1.96
NUP54-209ENST00000510569 MRPS31Q92665 395 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms