RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 DYNLT3P51808 116 aa13.02□□□□□ -0.32
USP38-202ENST00000510377 PCBD1P61457 104 aa13.02□□□□□ -0.32
USP38-202ENST00000510377 ZNF154Q13106 437 aa13.02□□□□□ -0.32
USP38-202ENST00000510377 SURF2Q15527 256 aaPredicted RBP13.02□□□□□ -0.32
USP38-202ENST00000510377 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.02□□□□□ -0.32
USP38-202ENST00000510377 UFSP2Q9NUQ7 469 aa13.02□□□□□ -0.32
USP38-202ENST00000510377 POMT1Q9Y6A1 747 aa13.02□□□□□ -0.32
USP38-202ENST00000510377 H0YL77 283 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 FUT3P21217 361 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 SSX2Q16385 188 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 CST9LP1Q5W188 147 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 ZNF383Q8NA42 475 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 OR1F12Q8NHA8 337 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 RASL10BQ96S79 203 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 HINT2Q9BX68 163 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 WNT16Q9UBV4 365 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 A0A0C4DFX4 3053 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 DLK1P80370 383 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 LHFPL2Q6ZUX7 228 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 CYTL1Q9NRR1 136 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 FANCMQ8IYD8 2048 aa13.02□□□□□ -0.33
USP38-202ENST00000510377 SPTAN1Q13813 2472 aaKnown RBP13.02□□□□□ -0.33
USP38-202ENST00000510377 VAMP5O95183 116 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 P2RY1P47900 373 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 ZNF343Q6P1L6 599 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 CPT1CQ8TCG5 803 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 SPSB1Q96BD6 273 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 GSN-AS1Q9NRJ2 163 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 LAMP3Q9UQV4 416 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 NOSIPQ9Y314 301 aaKnown RBP13.01□□□□□ -0.33
USP38-202ENST00000510377 TMED3Q9Y3Q3 217 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 R4GN57 208 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 ANKRD30BLA7E2S9 258 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 CELA2AP08217 269 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 SEC11BP0C7V7 166 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 PGA4P0DJD7 388 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 PGA3P0DJD8 388 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 GPM6AP51674 278 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 MPV17LQ2QL34 196 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 PLPPR5Q32ZL2 321 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 GUSBP11Q6P575 273 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 LHX4Q969G2 390 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 FSCN3Q9NQT6 498 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 TRAV39A0A0B4J263 110 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 C5orf49A4QMS7 147 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 FOLR3P41439 243 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 FAM3AP98173 230 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 ZP4Q12836 540 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 HABP2Q14520 560 aaPredicted RBP13.01□□□□□ -0.33
USP38-202ENST00000510377 RABEPKQ7Z6M1 372 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 OR10S1Q8NGN2 331 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 RNF166Q96A37 237 aaPredicted RBP13.01□□□□□ -0.33
USP38-202ENST00000510377 CYYR1Q96J86 154 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 CHST5Q9GZS9 411 aa13.01□□□□□ -0.33
USP38-202ENST00000510377 BARX1Q9HBU1 254 aaPredicted RBP13.01□□□□□ -0.33
USP38-202ENST00000510377 IGKV1D-8A0A087WSZ0 117 aa13□□□□□ -0.33
USP38-202ENST00000510377 A0A1W2PPQ1 181 aa13□□□□□ -0.33
USP38-202ENST00000510377 PQLC2LA1A4F0 135 aa13□□□□□ -0.33
USP38-202ENST00000510377 CYTIPO60759 359 aa13□□□□□ -0.33
USP38-202ENST00000510377 DFFBO76075 338 aa13□□□□□ -0.33
USP38-202ENST00000510377 METTL15P1P0C7V9 234 aa13□□□□□ -0.33
USP38-202ENST00000510377 PMP22Q01453 160 aa13□□□□□ -0.33
USP38-202ENST00000510377 IL13RA2Q14627 380 aa13□□□□□ -0.33
USP38-202ENST00000510377 CYB561D1Q8N8Q1 229 aa13□□□□□ -0.33
USP38-202ENST00000510377 OIT3Q8WWZ8 545 aa13□□□□□ -0.33
USP38-202ENST00000510377 RAB39BQ96DA2 213 aa13□□□□□ -0.33
USP38-202ENST00000510377 BSCL2Q96G97 398 aaPredicted RBP13□□□□□ -0.33
USP38-202ENST00000510377 SMIM7Q9BQ49 75 aa13□□□□□ -0.33
USP38-202ENST00000510377 TIMM10BQ9Y5J6 103 aa13□□□□□ -0.33
USP38-202ENST00000510377 ZNF816-ZNF321PA0A0X1KG74 233 aa13□□□□□ -0.33
USP38-202ENST00000510377 F8VVB4 439 aa13□□□□□ -0.33
USP38-202ENST00000510377 F8VWA3 439 aa13□□□□□ -0.33
USP38-202ENST00000510377 PDCD6O75340 191 aa13□□□□□ -0.33
USP38-202ENST00000510377 SCGB1D1O95968 90 aa13□□□□□ -0.33
USP38-202ENST00000510377 BMP5P22003 454 aa13□□□□□ -0.33
USP38-202ENST00000510377 SYT13Q7L8C5 426 aa13□□□□□ -0.33
USP38-202ENST00000510377 TBC1D26Q86UD7 250 aa13□□□□□ -0.33
USP38-202ENST00000510377 OR10J5Q8NHC4 309 aa13□□□□□ -0.33
USP38-202ENST00000510377 SNX22Q96L94 193 aa13□□□□□ -0.33
USP38-202ENST00000510377 SMOC1Q9H4F8 434 aa13□□□□□ -0.33
USP38-202ENST00000510377 FTCDNL1E5RQL4 147 aa13□□□□□ -0.33
USP38-202ENST00000510377 TRAF3IP2O43734 574 aaPredicted RBP13□□□□□ -0.33
USP38-202ENST00000510377 CHST1O43916 411 aa13□□□□□ -0.33
USP38-202ENST00000510377 CER1O95813 267 aa13□□□□□ -0.33
USP38-202ENST00000510377 OSGIN2Q9Y236 505 aa13□□□□□ -0.33
USP38-202ENST00000510377 H7BYZ3 331 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 LDLRAD4O15165 306 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 PPYP01298 95 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 HLA-GP17693 338 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 SNCAP37840 140 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 SUPT4H1P63272 117 aaKnown RBP12.99□□□□□ -0.33
USP38-202ENST00000510377 SNAI3Q3KNW1 292 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 NAT6Q93015 286 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 FAM210BQ96KR6 192 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 CACFD1Q9UGQ2 172 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 DOCK8Q8NF50 2099 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 MASP2O00187 686 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 GAPDHP04406 335 aaKnown RBP12.99□□□□□ -0.33
USP38-202ENST00000510377 FCGR3AP08637 254 aa12.99□□□□□ -0.33
USP38-202ENST00000510377 HBG1P69891 147 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms