RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ZNF567Q8N184 647 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 OSR2Q8N2R0 312 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 BPIFB2Q8N4F0 458 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 MS4A15Q8N5U1 240 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 IQCF1Q8N6M8 205 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 GJC3Q8NFK1 279 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 OR11H4Q8NGC9 324 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 OR4N2Q8NGD1 307 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 OR8D4Q8NGM9 314 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 OR6K6Q8NGW6 343 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 OR4L1Q8NH43 312 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 RAB2BQ8WUD1 216 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 DCUN1D4Q92564 292 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 UPRTQ96BW1 309 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 MRPS24Q96EL2 167 aaKnown RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 AURKBQ96GD4 344 aaPredicted RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 ADTRPQ96IZ2 230 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 TEX37Q96LM6 180 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 CCDC115Q96NT0 180 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 SIGLEC12Q96PQ1 595 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 ATP5SQ99766 215 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 MRPL57Q9BQC6 102 aaKnown RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 C16orf70Q9BSU1 422 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 NDFIP1Q9BT67 221 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 PSMG3Q9BT73 122 aaPredicted RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 CABLES2Q9BTV7 478 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 DOHHQ9BU89 302 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 EBPLQ9BY08 206 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 OR2J1Q9GZK6 312 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 CPVLQ9H3G5 476 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 TUBA4BQ9H853 241 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 TAF9BQ9HBM6 251 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 A4GALTQ9NPC4 353 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 MUTYHQ9UIF7 546 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 LSM4Q9Y4Z0 139 aaKnown RBP3.84□□□□□ -1.79
NIPBL-206ENST00000509429 ROBO3Q96MS0 1386 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 C10orf71Q711Q0 1435 aa3.84□□□□□ -1.79
NIPBL-206ENST00000509429 COL5A3P25940 1745 aaPredicted RBP3.84□□□□□ -1.8
NIPBL-206ENST00000509429 STRCP1A6NGW2 1772 aa3.84□□□□□ -1.8
NIPBL-206ENST00000509429 A0A087WUU8 490 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 TRAV38-1A0A0B4J264 116 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF816-ZNF321PA0A0X1KG74 233 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 FOXI3A8MTJ6 420 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-206ENST00000509429 B5MCH6 92 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF814B7Z6K7 855 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 TMEM150CB9EJG8 249 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 TRIM49D1C9J1S8 452 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF195O14628 629 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 PHOX2AO14813 284 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 XRCC3O43542 346 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 FAM189A1O60320 539 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 ZIC3O60481 467 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 GCGP01275 180 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 PMP2P02689 132 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 MT-ND4LP03901 98 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 SHBGP04278 402 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 CD2P06729 351 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 UMODP07911 640 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 ELANEP08246 267 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 T-ENOLP0DO92 83 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 SPNP16150 400 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 HOXB9P17482 250 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-206ENST00000509429 SDC1P18827 310 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 PGCP20142 388 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 MAOAP21397 527 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 GATA3P23771 443 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 NPY1RP25929 384 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 LOXP28300 417 aaPredicted RBP3.83□□□□□ -1.8
NIPBL-206ENST00000509429 PYCR1P32322 319 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 GLRXP35754 106 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 OR1E2P47887 323 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 AMTP48728 403 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 ARPP19P56211 112 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 LOXL3P58215 753 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 RPL31P62899 125 aaKnown RBP3.83□□□□□ -1.8
NIPBL-206ENST00000509429 EIF5AP63241 154 aaKnown RBP3.83□□□□□ -1.8
NIPBL-206ENST00000509429 HIST1H3AP68431 136 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 H3F3AP84243 136 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 FKBP3Q00688 224 aaKnown RBP3.83□□□□□ -1.8
NIPBL-206ENST00000509429 DEFA5Q01523 94 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 FMODQ06828 376 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 PPP1R1AQ13522 171 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 PEA15Q15121 130 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 GUSBP1Q15486 140 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 OR8B8Q15620 311 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 NRF1Q16656 503 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 HLA-DRB5Q30154 266 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 SLC25A52Q3SY17 297 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 ATP6AP1LQ52LC2 224 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 C10orf91Q5T1B1 145 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 C1orf194Q5T5A4 169 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 CDC42EP5Q6NZY7 148 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 SLC25A47Q6Q0C1 308 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 ADAMTSL5Q6ZMM2 481 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF66Q6ZN08 573 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 HIST2H3AQ71DI3 136 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 ANKRD37Q7Z713 158 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 OAFQ86UD1 273 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 CALHM3Q86XJ0 350 aa3.83□□□□□ -1.8
NIPBL-206ENST00000509429 IZUMO1Q8IYV9 350 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms