RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ATPAF1Q5TC12 328 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 DDI2Q5TDH0 399 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 ASCL4Q6XD76 172 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 ZNF788Q6ZQV5 615 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 LHFPL2Q6ZUX7 228 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 C9orf139Q6ZV77 190 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 TCF23Q7RTU1 214 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 VMO1Q7Z5L0 202 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 CEACAM19Q7Z692 300 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 TMEM185AQ8NFB2 350 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 TSPAN14Q8NG11 270 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 SPSB1Q96BD6 273 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 BORCS8Q96FH0 119 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 TBX15Q96SF7 602 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 NAA50Q9GZZ1 169 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 DNTTIP1Q9H147 329 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 RASL12Q9NYN1 266 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 POLDIP2Q9Y2S7 368 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 FAM96BQ9Y3D0 163 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 ANK2Q01484 3957 aa7.2□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A0B4J203 849 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 IGHV1-69DA0A0B4J2H0 117 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A1W2PRD5 423 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A1W2PRF3 423 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A1W2PRM7 423 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 TMEM82A0PJX8 343 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 SMIM30A4D0T7 59 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 RFPL4AA6NLU0 287 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 RFPL4AL1F8VTS6 287 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 SIGLEC5O15389 551 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 HOXA3O43365 443 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 PSPNO60542 156 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 ZNF737O75373 536 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 TNFAIP8O95379 198 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 IGHV1-69P01742 117 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 TFAP2AP05549 437 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 RNASE1P07998 156 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 HCKP08631 526 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 CLEC2LP0C7M8 214 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 MMP9P14780 707 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 RAB3AP20336 220 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 BDKRB2P30411 391 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 SNU13P55769 128 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 QRFPP83859 136 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 PIGYQ3MUY2 71 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 AWAT1Q58HT5 328 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 Q6P435 159 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 C17orf107Q6ZR85 190 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 FAM185AQ8N0U4 392 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 SVOPQ8N4V2 548 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 ZNRF1Q8ND25 227 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 TMEM104Q8NE00 496 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 Q8NFD4 153 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 OR5D14Q8NGL3 314 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 CEP19Q96LK0 163 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 MYCBPQ99417 103 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 DCTN5Q9BTE1 182 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 CENPOQ9BU64 300 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 SIRPDQ9H106 197 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 SIRT7Q9NRC8 400 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 TXNL4BQ9NX01 149 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 OR14J1Q9UGF5 321 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 FOXJ3Q9UPW0 622 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 KPTNQ9Y664 436 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 FBN3Q75N90 2809 aa7.19□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A0A6YYD4 124 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 TRDV1A0A1B0GX56 115 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A1W2PPH5 198 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 MEX3AA1L020 520 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 CLDN34H7C241 214 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 CCRL2O00421 344 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 HKR1P10072 659 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 SRMP19623 302 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 PRKACBP22694 351 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 PRDX2P32119 198 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 ALDH3B2P48448 385 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 COMPP49747 757 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 ATP1B3P54709 279 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 CAV3P56539 151 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 ERVFRD-1P60508 538 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 PRB3Q04118 309 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 UNC119Q13432 240 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 C22orf42Q6IC83 251 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 OR10K2Q6IF99 312 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 C16orf87Q6PH81 154 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 SLC16A12Q6ZSM3 486 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 SATL1Q86VE3 508 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 MS4A15Q8N5U1 240 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 LY6G5BQ8NDX9 201 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 TBC1D15Q8TC07 691 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 TNFAIP8L1Q8WVP5 186 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 SDSLQ96GA7 329 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 NR1H4Q96RI1 486 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 HMG20AQ9NP66 347 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 TMEM138Q9NPI0 162 aa7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 AK6Q9Y3D8 172 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A087WXM4 84 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 A0A0U1RQK1 487 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 BTBD17A6NE02 478 aa7.17□□□□□ -1.26
PDLIM5-213ENST00000509357 CYB5AP00167 134 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms