RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 HILPDAQ9Y5L2 63 aa10.06□□□□□ -0.8
PDPN-208ENST00000509009 ORC6Q9Y5N6 252 aa10.06□□□□□ -0.8
PDPN-208ENST00000509009 DSCAML1Q8TD84 2053 aa10.06□□□□□ -0.8
PDPN-208ENST00000509009 IGHV2-26A0A0B4J1V2 119 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 G3V4G9 280 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 SIRPB1O00241 398 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 KDM4BO94953 1096 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 CD28P10747 220 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 GABRB1P18505 474 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 ALDH3A2P51648 485 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 SNU13P55769 128 aaKnown RBP10.05□□□□□ -0.8
PDPN-208ENST00000509009 P2RX3P56373 397 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 EMX1Q04741 257 aaPredicted RBP10.05□□□□□ -0.8
PDPN-208ENST00000509009 SLC34A1Q06495 639 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 ALKBH1Q13686 389 aaKnown RBP10.05□□□□□ -0.8
PDPN-208ENST00000509009 KIAA2026Q5HYC2 2103 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 LHFPL3Q86UP9 236 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 LYG1Q8N1E2 194 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 WIPF2Q8TF74 440 aaPredicted RBP10.05□□□□□ -0.8
PDPN-208ENST00000509009 CORO2AQ92828 525 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 RFT1Q96AA3 541 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 SPACA5Q96QH8 159 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 CLEC7AQ9BXN2 247 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 WNT10AQ9GZT5 417 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 GSTK1Q9Y2Q3 226 aa10.05□□□□□ -0.8
PDPN-208ENST00000509009 UBE2J1Q9Y385 318 aaPredicted RBP10.05□□□□□ -0.8
PDPN-208ENST00000509009 A0A0G2JK05 382 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 SNTNA6NMZ2 147 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 ALX3O95076 343 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 OR2H2O95918 312 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 HTR1DP28221 377 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 GLIPR1P48060 266 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 AESQ08117 197 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 GALEQ14376 348 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 KPNB1Q14974 876 aaKnown RBP10.04□□□□□ -0.8
PDPN-208ENST00000509009 BEAN1Q3B7T3 259 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 Q6P435 159 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 BAIAP2L2Q6UXY1 529 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 ZBTB49Q6ZSB9 765 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 TRAPPC6BQ86SZ2 158 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 SAXO1Q8IYX7 474 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 ABHD12Q8N2K0 398 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 CBR4Q8N4T8 237 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 OR13C3Q8NGS6 347 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 OR13C9Q8NGT0 318 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 RHOXF1Q8NHV9 184 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 NDNFQ8TB73 568 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 C4orf36Q96KX1 117 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 ZNF649Q9BS31 505 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 COMMD4Q9H0A8 199 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 ZCCHC4Q9H5U6 513 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 ISG20L2Q9H9L3 353 aaKnown RBP10.04□□□□□ -0.8
PDPN-208ENST00000509009 EXOSC4Q9NPD3 245 aaKnown RBP10.04□□□□□ -0.8
PDPN-208ENST00000509009 DPM3Q9P2X0 92 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 MYRFQ9Y2G1 1151 aa10.04□□□□□ -0.8
PDPN-208ENST00000509009 PLXNB1O43157 2135 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 FUOMA2VDF0 154 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 F2RL2O00254 374 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 FBXO24O75426 580 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 OCM2P0CE71 109 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 OCMP0CE72 109 aaPredicted RBP10.03□□□□□ -0.8
PDPN-208ENST00000509009 CDK2P24941 298 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 BDH1Q02338 343 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 SCN1BQ07699 218 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 NSUN5P1Q3KNT7 163 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 KPRPQ5T749 579 aaPredicted RBP10.03□□□□□ -0.8
PDPN-208ENST00000509009 SAMD5Q5TGI4 173 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 PRAMEF5Q5TYX0 476 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 OR52W1Q6IF63 320 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 ZFP1Q6P2D0 407 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 HEPN1Q6WQI6 88 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 RTN4RL2Q86UN3 420 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 SYS1Q8N2H4 156 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 OR5D18Q8NGL1 313 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 OR4P4Q8NGL7 312 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 OR5M11Q96RB7 305 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 SLC29A1Q99808 456 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 CITED2Q99967 270 aaPredicted RBP10.03□□□□□ -0.8
PDPN-208ENST00000509009 OCSTAMPQ9BR26 566 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 ALG8Q9BVK2 526 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 RHOFQ9HBH0 211 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 AMBNQ9NP70 447 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 TAS2R3Q9NYW6 316 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 GMPPBQ9Y5P6 360 aa10.03□□□□□ -0.8
PDPN-208ENST00000509009 TRGV10A0A0A0MS01 117 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 ADARB2-AS1A8MUL3 147 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 E9PI62 339 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 H3BUI4 141 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 DEGS1O15121 323 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 ZFPL1O95159 310 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 IGLV1-47P01700 117 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 TMEM225BP0DP42 221 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 DBTP11182 482 aaKnown RBP10.02□□□□□ -0.81
PDPN-208ENST00000509009 GDNFP39905 211 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 CDK5R1Q15078 307 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 KISS1Q15726 138 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 SERPINA12Q8IW75 414 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 OR5D14Q8NGL3 314 aa10.02□□□□□ -0.81
PDPN-208ENST00000509009 MRPL48Q96GC5 212 aaKnown RBP10.02□□□□□ -0.81
PDPN-208ENST00000509009 COQ2Q96H96 371 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms