RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SVBPQ8N300 66 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 GPHA2Q96T91 129 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
DDX41-208ENST00000507955 PRELID3BQ9Y3B1 194 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 ATMQ13315 3056 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 RCC1P18754 421 aaPredicted RBP12.48□□□□□ -0.41
DDX41-208ENST00000507955 BCL3P20749 454 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 LINC00518Q8N0U6 118 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 OR11L1Q8NGX0 322 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 HPSE2Q8WWQ2 592 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 ARL11Q969Q4 196 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 ZNF488Q96MN9 340 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 SLC5A7Q9GZV3 580 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 ZNF442Q9H7R0 627 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 C14orf166Q9Y224 244 aaKnown RBP12.48□□□□□ -0.41
DDX41-208ENST00000507955 MED12LQ86YW9 2145 aa12.48□□□□□ -0.41
DDX41-208ENST00000507955 ZNF705EA8MWA4 302 aaPredicted RBP12.47□□□□□ -0.41
DDX41-208ENST00000507955 NKX2-8O15522 239 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 PRKACAP17612 351 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 FLI1Q01543 452 aaPredicted RBP12.47□□□□□ -0.41
DDX41-208ENST00000507955 PRDX4Q13162 271 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 EIF3IQ13347 325 aaKnown RBP12.47□□□□□ -0.41
DDX41-208ENST00000507955 ESPL1Q14674 2120 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 CLEC9AQ6UXN8 241 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 MDS2Q8NDY4 140 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 OR5T2Q8NGG2 359 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 AQP10Q96PS8 301 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 PLA2G2EQ9NZK7 142 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 SPRR3Q9UBC9 169 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 SPAARA0A1B0GVQ0 90 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 NME2P1O60361 137 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 ZNF806P0C7X5 589 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 NME2P22392 152 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 FCGR2CP31995 323 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 PIGPP57054 158 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 SLC10A1Q14973 349 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 STK11Q15831 433 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 IGSF11Q5DX21 431 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 ASCL4Q6XD76 172 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 COLCA1Q6ZS62 124 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 KMT2EQ8IZD2 1858 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 LOXL4Q96JB6 756 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 PRDM14Q9GZV8 571 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 MMP26Q9NRE1 261 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 PARPBPQ9NWS1 579 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 LPAR3Q9UBY5 353 aa12.47□□□□□ -0.41
DDX41-208ENST00000507955 CARHSP1Q9Y2V2 147 aaKnown RBP12.47□□□□□ -0.41
DDX41-208ENST00000507955 SPTBN2O15020 2390 aa12.46□□□□□ -0.41
DDX41-208ENST00000507955 XRCC2O43543 280 aa12.46□□□□□ -0.41
DDX41-208ENST00000507955 ARG2P78540 354 aa12.46□□□□□ -0.41
DDX41-208ENST00000507955 RBM39Q14498 530 aaKnown RBP12.46□□□□□ -0.41
DDX41-208ENST00000507955 RPL7L1Q6DKI1 246 aaKnown RBP12.46□□□□□ -0.41
DDX41-208ENST00000507955 HAGHLQ6PII5 290 aaPredicted RBP12.46□□□□□ -0.41
DDX41-208ENST00000507955 MCEMP1Q8IX19 187 aa12.46□□□□□ -0.41
DDX41-208ENST00000507955 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.41
DDX41-208ENST00000507955 SPSB4Q96A44 273 aa12.46□□□□□ -0.41
DDX41-208ENST00000507955 REPIN1Q9BWE0 567 aaKnown RBP12.46□□□□□ -0.41
DDX41-208ENST00000507955 TREM1Q9NP99 234 aa12.46□□□□□ -0.41
DDX41-208ENST00000507955 ZNF292O60281 2723 aa12.46□□□□□ -0.41
DDX41-208ENST00000507955 IFNA2P01563 188 aa12.46□□□□□ -0.42
DDX41-208ENST00000507955 MUC1P15941 1255 aaPredicted RBP12.46□□□□□ -0.42
DDX41-208ENST00000507955 RBM11P57052 281 aaKnown RBP12.46□□□□□ -0.42
DDX41-208ENST00000507955 OR2A2Q6IF42 318 aa12.46□□□□□ -0.42
DDX41-208ENST00000507955 MRPL21Q7Z2W9 205 aaKnown RBP12.46□□□□□ -0.42
DDX41-208ENST00000507955 MYPOPQ86VE0 399 aaPredicted RBP12.46□□□□□ -0.42
DDX41-208ENST00000507955 GCNT2Q8N0V5 402 aa12.46□□□□□ -0.42
DDX41-208ENST00000507955 DEFB124Q8NES8 71 aa12.46□□□□□ -0.42
DDX41-208ENST00000507955 CPNE2Q96FN4 548 aaPredicted RBP12.46□□□□□ -0.42
DDX41-208ENST00000507955 C2orf50Q96LR7 162 aa12.46□□□□□ -0.42
DDX41-208ENST00000507955 RGCCQ9H4X1 137 aa12.46□□□□□ -0.42
DDX41-208ENST00000507955 BCO1Q9HAY6 547 aa12.46□□□□□ -0.42
DDX41-208ENST00000507955 UQCC1Q9NVA1 299 aa12.46□□□□□ -0.42
DDX41-208ENST00000507955 ARHGAP21Q5T5U3 1957 aa12.46□□□□□ -0.42
DDX41-208ENST00000507955 PCP4L1A6NKN8 68 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 SYNGR1O43759 233 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 LRP3O75074 770 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 NFYBP25208 207 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 RBMXP38159 391 aaKnown RBP12.45□□□□□ -0.42
DDX41-208ENST00000507955 LPAR6P43657 344 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 ID4P47928 161 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 CCDC54Q8NEL0 328 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 OR5L1Q8NGL2 311 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 CNTNAP3BQ96NU0 1288 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 SCGB3A2Q96PL1 93 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 LINC00470Q9BZP3 86 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 MTCH1Q9NZJ7 389 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 NDRG3Q9UGV2 375 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 HSF4Q9ULV5 492 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 KLF2Q9Y5W3 355 aaPredicted RBP12.45□□□□□ -0.42
DDX41-208ENST00000507955 ZNF732B4DXR9 585 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 KLRC4-KLRK1H3BQV0 150 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 LINC01387J3KSC0 135 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 IL18BPO95998 194 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 WNT5AP41221 380 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 PJVKQ0ZLH3 352 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 IAH1Q2TAA2 248 aaPredicted RBP12.45□□□□□ -0.42
DDX41-208ENST00000507955 DHRS7BQ6IAN0 325 aaPredicted RBP12.45□□□□□ -0.42
DDX41-208ENST00000507955 CACNA1GO43497 2377 aa12.45□□□□□ -0.42
DDX41-208ENST00000507955 RP1L1Q8IWN7 2480 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms