RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 MT-ND4LP03901 98 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 LYNX1P0DP58 116 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 BTF3P20290 206 aaKnown RBP6.82□□□□□ -1.32
SCN1A-207ENST00000507401 RAB4AP20338 218 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 HNF1AP20823 631 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 MSR1P21757 451 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 RPL4P36578 427 aaKnown RBP6.82□□□□□ -1.32
SCN1A-207ENST00000507401 ALDH3B1P43353 468 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 GPR6P46095 362 aaPredicted RBP6.82□□□□□ -1.32
SCN1A-207ENST00000507401 ACTA2P62736 377 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 ACTG2P63267 376 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 FAM120AOSQ5T036 256 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 MBNL2Q5VZF2 373 aaKnown RBP6.82□□□□□ -1.32
SCN1A-207ENST00000507401 ALKAL2Q6UX46 152 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 DRAM2Q6UX65 266 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 DPY19L2P2Q6ZN68 376 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 LILRB2Q8N423 598 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 OR1J1Q8NGS3 322 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 OR13C2Q8NGS9 318 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 STOML3Q8TAV4 291 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 SNX33Q8WV41 574 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 TMEM158Q8WZ71 300 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 SAT2Q96F10 170 aaPredicted RBP6.82□□□□□ -1.32
SCN1A-207ENST00000507401 WDR89Q96FK6 387 aaPredicted RBP6.82□□□□□ -1.32
SCN1A-207ENST00000507401 S100A16Q96FQ6 103 aaKnown RBP6.82□□□□□ -1.32
SCN1A-207ENST00000507401 MARS2Q96GW9 593 aaKnown RBP6.82□□□□□ -1.32
SCN1A-207ENST00000507401 SLC25A21Q9BQT8 299 aaPredicted RBP6.82□□□□□ -1.32
SCN1A-207ENST00000507401 OR2H1Q9GZK4 316 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 ELOVL3Q9HB03 270 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 HRASLSQ9HDD0 168 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 HAO2Q9NYQ3 351 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 ZNF69Q9UC07 566 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 CGGBP1Q9UFW8 167 aaPredicted RBP6.82□□□□□ -1.32
SCN1A-207ENST00000507401 FZR1Q9UM11 496 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 SIGLEC7Q9Y286 467 aa6.82□□□□□ -1.32
SCN1A-207ENST00000507401 SVEP1Q4LDE5 3571 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 PRSS37A4D1T9 235 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 C5orf49A4QMS7 147 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 UNC119BA6NIH7 251 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 FAM74A7A6NL05 159 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 LINC00587B1AMM8 73 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 ARPC5O15511 151 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 FGF16O43320 207 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 LANCL1O43813 399 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 TXNDC12O95881 172 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 ADH4P08319 380 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 ZNF16P17020 682 aaPredicted RBP6.81□□□□□ -1.32
SCN1A-207ENST00000507401 SRD5A1P18405 259 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 CCNOP22674 350 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 GCH1P30793 250 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 SDHAP31040 664 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 GPR4P46093 362 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 OMPP47874 163 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 ARHGDIBP52566 201 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 DVL1P1P54792 670 aaPredicted RBP6.81□□□□□ -1.32
SCN1A-207ENST00000507401 LSM6P62312 80 aaKnown RBP6.81□□□□□ -1.32
SCN1A-207ENST00000507401 ENDOGQ14249 297 aaKnown RBP6.81□□□□□ -1.32
SCN1A-207ENST00000507401 PEA15Q15121 130 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 KCNMB1Q16558 191 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 PNLIPRP3Q17RR3 467 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 FAM74A3Q4VXF1 159 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 OR2G6Q5TZ20 316 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 ACOT7LQ6ZUV0 252 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 ANGPTL5Q86XS5 388 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 ZNF101Q8IZC7 436 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 SYS1Q8N2H4 156 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 COMMD1Q8N668 190 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 BPIFCQ8NFQ6 507 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 OR2T33Q8NG76 320 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 OR2AK2Q8NG84 335 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 AKR7LQ8NHP1 331 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 KLF14Q8TD94 323 aaPredicted RBP6.81□□□□□ -1.32
SCN1A-207ENST00000507401 MALSU1Q96EH3 234 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 C4orf45Q96LM5 186 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 Q96M85 177 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 DIRC2Q96SL1 478 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 SOX7Q9BT81 388 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 WNT5BQ9H1J7 359 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 MMP26Q9NRE1 261 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 VSX1Q9NZR4 365 aaPredicted RBP6.81□□□□□ -1.32
SCN1A-207ENST00000507401 COMMD9Q9P000 198 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 ADAM18Q9Y3Q7 739 aa6.81□□□□□ -1.32
SCN1A-207ENST00000507401 DNHD1Q96M86 4753 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 CUBNO60494 3623 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 A0A0G2JK05 382 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 OR6C68A6NDL8 312 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 GGT3PA6NGU5 568 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 M0R129 80 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 ARPC3O15145 178 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 SURF4O15260 269 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 NUPL2O15504 423 aaKnown RBP6.8□□□□□ -1.32
SCN1A-207ENST00000507401 EIF3GO75821 320 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCN1A-207ENST00000507401 SOX14O95416 240 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 ACAA1P09110 424 aaPredicted RBP6.8□□□□□ -1.32
SCN1A-207ENST00000507401 UCHL1P09936 223 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 HLA-GP17693 338 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 CFPP27918 469 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 IL2RGP31785 369 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 WNT5AP41221 380 aa6.8□□□□□ -1.32
SCN1A-207ENST00000507401 MAGEB1P43366 347 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms