RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 IGHV2-26A0A0B4J1V2 119 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 MEGF11A6BM72 1044 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 OR4C45A6NMZ5 311 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 E9PQ18 207 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 J3QLW9 94 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 OPN1MWP04001 364 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 OPN1MW2P0DN77 364 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 OPN1MW3P0DN78 364 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 ZNF19P17023 458 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 BCL3P20749 454 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 BRS3P32247 399 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 CEACAM3P40198 252 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 NPBWR2P48146 333 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 RAB40BQ12829 278 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 HEPN1Q6WQI6 88 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 OR4S1Q8NGB4 309 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 OR52N4Q8NGI2 321 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 FAM110DQ8TAY7 271 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 NDNFQ8TB73 568 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 CAPSLQ8WWF8 208 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 CORO2AQ92828 525 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 RNF166Q96A37 237 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 PELI1Q96FA3 418 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 C4orf36Q96KX1 117 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 NKX3-1Q99801 234 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 ALG8Q9BVK2 526 aa11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 RPL36Q9Y3U8 105 aaKnown RBP11.65□□□□□ -0.54
HMGCS1-203ENST00000507004 A0A0G2JK05 382 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 MAGEB3O15480 346 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 CHST1O43916 411 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 PSPNO60542 156 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 FBXO24O75426 580 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 INMTO95050 263 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 IGHA1P01876 353 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 OR3A1P47881 315 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 MTNR1BP49286 362 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 GBX2P52951 348 aaPredicted RBP11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 NANOS3P60323 173 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 SLC34A1Q06495 639 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 KLHL22Q53GT1 634 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 CBR4Q8N4T8 237 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 PARP16Q8N5Y8 322 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 OR13C9Q8NGT0 318 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 LGALS12Q96DT0 336 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 CHST6Q9GZX3 395 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 NCOR1P1Q9H4R4 102 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 ZNF702PQ9H963 129 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 OR6C3Q9NZP0 311 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 DPM3Q9P2X0 92 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 GSTK1Q9Y2Q3 226 aa11.64□□□□□ -0.55
HMGCS1-203ENST00000507004 IRGMA1A4Y4 181 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 FAM90A22PA8MWA6 464 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 LEUTXA8MZ59 168 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 OOSP1A8MZH6 123 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 H3BNX3 289 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 SULT1B1O43704 296 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 XPNPEP2O43895 674 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 OR2H2O95918 312 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 HCKP08631 526 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 VSIG10L2P0DP72 767 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 ZNF44P15621 663 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 CD34P28906 385 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 BDH1Q02338 343 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 KPNB1Q14974 876 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 ZIK1Q3SY52 487 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 ARSJQ5FYB0 599 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 CCDC144NLQ6NUI1 221 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 TCF23Q7RTU1 214 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 NDUFA11Q86Y39 141 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 PXT1Q8NFP0 134 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 OR4F17Q8NGA8 305 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 OR4D6Q8NGJ1 314 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 OR5AK2Q8NH90 309 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 RHOXF1Q8NHV9 184 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 RDH12Q96NR8 316 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 OR4F4Q96R69 305 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 PCDHB16Q9NRJ7 776 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 MRPS18AQ9NVS2 196 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 DHDHQ9UQ10 334 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 SIGLEC9Q9Y336 463 aa11.63□□□□□ -0.55
HMGCS1-203ENST00000507004 MEGF8Q7Z7M0 2845 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 ZNF729A6NN14 1252 aaPredicted RBP11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 SIRPB1O00241 398 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 DEGS1O15121 323 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 CD2P06729 351 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 TMEM225BP0DP42 221 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 GABRB1P18505 474 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 DUSP1P28562 367 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 PTGFRP43088 359 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 KCNJ3P48549 501 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 PRRX1P54821 245 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 LPCAT4Q643R3 524 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 ELP2Q6IA86 826 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 DYNAPQ8N1N2 210 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 ABHD12Q8N2K0 398 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 TPRX1Q8N7U7 411 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 ZNF565Q8N9K5 539 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 LIN7BQ9HAP6 207 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 SERTAD4Q9NUC0 356 aa11.62□□□□□ -0.55
HMGCS1-203ENST00000507004 ERVK13-1Q9NX77 482 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms