RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ZNF45Q02386 682 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 CBX3Q13185 183 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TPBGQ13641 420 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 CRMP1Q14194 572 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR7A5Q15622 319 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TOMM34Q15785 309 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PLPPR5Q32ZL2 321 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NDUFAF6Q330K2 333 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF829Q3KNS6 432 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PRR30Q53SZ7 412 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TEX30Q5JUR7 227 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 SPANXN2Q5MJ10 180 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 RAET1LQ5VY80 246 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR5M10Q6IEU7 315 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 LAIR2Q6ISS4 152 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NIPAL3Q6P499 406 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 RPL22L1Q6P5R6 122 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 LEG1Q6P5S2 330 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 DEGS2Q6QHC5 323 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF322Q6U7Q0 402 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ISLR2Q6UXK2 745 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 Q6ZPB1 254 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TMPPEQ6ZT21 453 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM122BQ7Z309 247 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM220AQ7Z4H9 259 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 BATF2Q8N1L9 274 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 C11orf42Q8N5U0 333 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 LRRC17Q8N6Y2 441 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 FADS6Q8N9I5 356 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 DEFB124Q8NES8 71 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR10H4Q8NGA5 316 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR51G2Q8NGK0 314 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR8D4Q8NGM9 314 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR6K6Q8NGW6 343 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR4K13Q8NH42 304 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR6X1Q8NH79 312 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 MCFD2Q8NI22 146 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 VN1R17PQ8TDU5 208 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 C15orf40Q8WUR7 153 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM37Q8WXS4 190 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ACOT12Q8WYK0 555 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ITFG2Q969R8 447 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 CPNE4Q96A23 557 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM186Q96B77 213 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TMIGD2Q96BF3 282 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 YIPF6Q96EC8 236 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC25A44Q96H78 314 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 JSRP1Q96MG2 331 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 KCTD7Q96MP8 289 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OXGR1Q96P68 337 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 SIGLEC12Q96PQ1 595 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR5B2Q96R09 309 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NMNAT3Q96T66 252 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 SH3GL3Q99963 347 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 MED18Q9BUE0 208 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PAXXQ9BUH6 204 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ALG12Q9BV10 488 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 MROQ9BYG7 248 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PLA2G12AQ9BZM1 189 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NMNAT2Q9BZQ4 307 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 YIPF3Q9GZM5 350 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 COMMD4Q9H0A8 199 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 SLITRK2Q9H156 845 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 OR51V1Q9H2C8 321 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NIPAL2Q9H841 368 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 WDR76Q9H967 626 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 LIN28AQ9H9Z2 209 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 SH2D2AQ9NP31 389 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 HMG20AQ9NP66 347 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PALMDQ9NP74 551 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ESM1Q9NQ30 184 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NDUFB11Q9NX14 153 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 TAS2R5Q9NYW4 299 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 DNAJC27Q9NZQ0 273 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 MED11Q9P086 117 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 EMC3Q9P0I2 261 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 RABL2AQ9UBK7 228 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 CKLFQ9UBR5 152 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 Q9UF83 564 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 IL19Q9UHD0 177 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 IL20RAQ9UHF4 553 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 ENPP5Q9UJA9 477 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 LAMP5Q9UJQ1 280 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NPIPA1Q9UND3 350 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 RABL2BQ9UNT1 228 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 NTNG1Q9Y2I2 539 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PEX16Q9Y5Y5 336 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 FKBP7Q9Y680 259 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 CHCHD2Q9Y6H1 151 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 KIF25-AS1Q9Y6Z4 181 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 COL5A1P20908 1838 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 C5orf42Q9H799 3197 aa1.88□□□□□ -2.11
TOPBP1-205ENST00000506779 PRUNE2Q8WUY3 3088 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 PIKFYVEQ9Y2I7 2098 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 F5P12259 2224 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 REV3LO60673 3130 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 A0A075B6Q4 140 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 TRAV1-2A0A0B4J238 106 aa1.87□□□□□ -2.11
TOPBP1-205ENST00000506779 TRAV17A0A0B4J275 112 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms