RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 PSPNO60542 156 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 GPR6P46095 362 aaPredicted RBP6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 ART1P52961 327 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 C2orf76Q3KRA6 126 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 SLC35E4Q6ICL7 350 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 Q8N7P7 452 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 FAM3DQ96BQ1 224 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 MED30Q96HR3 178 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 ZNF488Q96MN9 340 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 GAL3ST1Q99999 423 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 MIXL1Q9H2W2 232 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 RAB22AQ9UL26 194 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 INSIG2Q9Y5U4 225 aa6.85□□□□□ -1.31
CDC42SE2-208ENST00000505065 SETXQ7Z333 2677 aaKnown RBP6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 IGHV2-70DA0A0C4DH43 119 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 C15orf65H3BRN8 121 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 J3QLI3 93 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 HAND1O96004 215 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 GRPP07492 148 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 PRDX2P32119 198 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 RAB11BQ15907 218 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 Q3ZCU0 254 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 WDR25Q64LD2 544 aaPredicted RBP6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 GLIPR1L1Q6UWM5 242 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 KCNG3Q8TAE7 436 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 GTF2A1LQ9UNN4 478 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 PNMA8CA0A1B0GUJ8 204 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 TRAPPC2LH3BP13 241 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 OR2H2O95918 312 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 MAS1P04201 325 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 MYL9P24844 172 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 SEC61A1P61619 476 aaKnown RBP6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 PLAC9Q5JTB6 97 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 COMMD2Q86X83 199 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 OR8H2Q8N162 312 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 TNFRSF14Q92956 283 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 CHCHD6Q9BRQ6 235 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 PCDHB16Q9NRJ7 776 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 LPAR3Q9UBY5 353 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 FAM201AQ5SY85 155 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 TRMT10AQ8TBZ6 339 aaKnown RBP6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 TMPRSS13Q9BYE2 586 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 SLITRK2Q9H156 845 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 LIN7BQ9HAP6 207 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 ADAM30Q9UKF2 790 aa6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 AK6Q9Y3D8 172 aaKnown RBP6.84□□□□□ -1.31
CDC42SE2-208ENST00000505065 CMYA5Q8N3K9 4069 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 TRAV20A0A0B4J274 112 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 DPPA5A6NC42 116 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 M0R1W7 72 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 ZNF182P17025 639 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 EFNB2P52799 333 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 VBP1P61758 197 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 TMEM249Q2WGJ8 235 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 OR4S1Q8NGB4 309 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 TNFAIP8L1Q8WVP5 186 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 SEH1LQ96EE3 360 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 SPACA5Q96QH8 159 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 UBE2J1Q9Y385 318 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 TEX15Q9BXT5 2789 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 A0A1W2PP11 408 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 C3orf80F5H4A9 247 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 PLATP00750 562 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 HCKP08631 526 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 MGMTP16455 207 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 ZNF260Q3ZCT1 412 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 UBE2NLQ5JXB2 153 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 HECTD1Q9ULT8 2610 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 KIR2DS1A0A191URI9 304 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 A0A1W2PPK0 400 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 ODF3BA8MYP8 253 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 C22orf46C9J442 243 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 H3BUI4 141 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 CTDSPLO15194 276 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 GLRA1P23415 457 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 MICBQ29980 383 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 TMEM30BQ3MIR4 351 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 PIGYQ3MUY2 71 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 LINC01356Q8N9X3 169 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 PNLDC1Q8NA58 520 aaKnown RBP6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 DEFB108BQ8NET1 73 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 CCL17Q92583 94 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 DGCR14Q96DF8 476 aaKnown RBP6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 TIMD4Q96H15 378 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 F2RL2O00254 374 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 ANGPTL7O43827 346 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 SCGNO76038 276 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 GTF2F2P13984 249 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 PTBP1P26599 531 aaKnown RBP eCLIP6.83□□□□□ -1.321e-7■■■■□ 24.1
CDC42SE2-208ENST00000505065 IL13RA1P78552 427 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 COL10A1Q03692 680 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 HMGN3Q15651 99 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 C17orf58Q2M2W7 97 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 C1orf229Q6ZS94 237 aaPredicted RBP6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 UPRTQ96BW1 309 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 RAB39BQ96DA2 213 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 CYYR1Q96J86 154 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 BATF3Q9NR55 127 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 TAS2R3Q9NYW6 316 aa6.83□□□□□ -1.32
CDC42SE2-208ENST00000505065 RABL2AQ9UBK7 228 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms