RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	C22orf46	C9J442	243 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	TPD52L2	O43399	206 aa	Known RBP	4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	PPIH	O43447	177 aa	Known RBP	4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	TMEM127	O75204	238 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	BPNT1	O95861	308 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR2H2	O95918	312 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	GYPA	P02724	150 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	IGHV4-31	P0DP07	118 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	TMEM225B	P0DP42	221 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	MGMT	P16455	207 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	USF1	P22415	310 aa	Predicted RBP	4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	DUSP1	P28562	367 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	PRDX2	P32119	198 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR3A1	P47881	315 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	SCAND1	P57086	179 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	IL13RA2	Q14627	380 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	PDCD1	Q15116	288 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	MICB	Q29980	383 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	CR1L	Q2VPA4	569 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	TMEM249	Q2WGJ8	235 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	SLC22A6	Q4U2R8	563 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	PLAC9	Q5JTB6	97 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	HES5	Q5TA89	166 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	WDR25	Q64LD2	544 aa	Predicted RBP	4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	GLT8D1	Q68CQ7	371 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	C1orf229	Q6ZS94	237 aa	Predicted RBP	4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR2W3	Q7Z3T1	314 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788		Q8IYB0	196 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	C1orf87	Q8N0U7	546 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	JAGN1	Q8N5M9	183 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	DEFB108B	Q8NET1	73 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR11L1	Q8NGX0	322 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	C8orf46	Q8TAG6	207 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	RAB1C	Q92928	201 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	PTX4	Q96A99	478 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM3D	Q96BQ1	224 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	MSI2	Q96DH6	328 aa	Known RBP	4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	CCL13	Q99616	98 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	PIMREG	Q9BSJ6	248 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	DCSTAMP	Q9H295	470 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	BANF2	Q9H503	90 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	ZNF665	Q9H7R5	613 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	MMP26	Q9NRE1	261 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	GHRL	Q9UBU3	117 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	ST3GAL6	Q9Y274	331 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	GSTK1	Q9Y2Q3	226 aa		4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	NIPBL	Q6KC79	2804 aa	eCLIP	4.09	□□□□□ -1.76
LMNB1-208	ENST00000504788	PPIAL4C	A0A0B4J2A2	164 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A10P	A6NDY2	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A18P	A6NE21	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A16P	A6NEW6	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A20P	A6NIJ5	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A8P	A6NJQ4	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A7P	A6NKC0	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A22P	A8MWA6	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A12P	A8MX19	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A5P	A8MXJ8	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A23P	A8MXZ1	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	DVL1	O14640	695 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	SOCS1	O15524	211 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	NDUFA2	O43678	99 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	ZNF780A	O75290	641 aa	Predicted RBP	4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	NXPH2	O95156	264 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	HAND1	O96004	215 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	TK1	P04183	234 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A15P	P0C7V4	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A13P	P0C7W8	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A14P	P0C7W9	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM90A24P	P0C7X0	464 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	UBB	P0CG47	229 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	MMP9	P14780	707 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	ARSB	P15848	533 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	PRKACA	P17612	351 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	SERPINA2	P20848	420 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	CPT2	P23786	658 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	CHAT	P28329	748 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	PSMD7	P51665	324 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	DLX6	P56179	175 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	GMFB	P60983	142 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	COL10A1	Q03692	680 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	P2RY14	Q15391	338 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	TAF9	Q16594	264 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	SMIM21	Q3B7S5	101 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	OLFML2A	Q68BL7	652 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	AWAT2	Q6E213	333 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	OSR2	Q8N2R0	312 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	MUC20	Q8N307	709 aa	Predicted RBP	4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	ZNF561	Q8N587	486 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	OR4S1	Q8NGB4	309 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	PLPPR1	Q8TBJ4	325 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	LGALS14	Q8TCE9	139 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	DYRK2	Q92630	601 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	TNFRSF14	Q92956	283 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	EMG1	Q92979	244 aa	Known RBP	4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	CPNE2	Q96FN4	548 aa	Predicted RBP	4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	SMR3A	Q99954	134 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	FAM234A	Q9H0X4	552 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	METTL9	Q9H1A3	318 aa		4.08	□□□□□ -1.76
LMNB1-208	ENST00000504788	ABCG5	Q9H222	651 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms