RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 HLA-HP01893 362 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 PGA3P0DJD8 388 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ST6GAL1P15907 406 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CD22P20273 847 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 BMP5P22003 454 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 DUSP1P28562 367 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MTNR1BP49286 362 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 UCP2P55851 309 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ZXDAP98168 799 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 EFNB1P98172 346 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TGFBR3Q03167 851 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 PMPCAQ10713 525 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MFAP5Q13361 173 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 PLPPR5Q32ZL2 321 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SP6Q3SY56 376 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 UBE2NLQ5JXB2 153 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TMEM268Q5VZI3 342 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 LILRA6Q6PI73 481 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SMIM15Q7Z3B0 74 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TSEN54Q7Z6J9 526 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 OR2C3Q8N628 320 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 OR5L2Q8NGL0 311 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 OR13D1Q8NGV5 346 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 PRR7Q8TB68 274 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MARCH1Q8TCQ1 289 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 NEURL3Q96EH8 262 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SLC35A4Q96G79 324 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 UBL7Q96S82 380 aaPredicted RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 FAM173AQ9BQD7 235 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 NRIP2Q9BQI9 281 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 UTP23Q9BRU9 249 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 NIPSNAP3BQ9BS92 247 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 FOXQ1Q9C009 403 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 PELI2Q9HAT8 420 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CDH20Q9HBT6 801 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 MBNL1Q9NR56 388 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 CUTCQ9NTM9 273 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 GAR1Q9NY12 217 aaKnown RBP3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TAS2R4Q9NYW5 299 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SLC23A2Q9UGH3 650 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 DUSP13Q9UII6 198 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 PILRBQ9UKJ0 227 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 TRAPPC2LQ9UL33 140 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ST3GAL6Q9Y274 331 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 KCNE3Q9Y6H6 103 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 EML5Q05BV3 1969 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 SPEGQ15772 3267 aa3.24□□□□□ -1.89
PCDH11X-208ENST00000504220 ELOA3CA0A087WX78 387 aaPredicted RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 IGHV2OR16-5A0A0B4J2B6 119 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PRSS38A1L453 326 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 HMSDA8MTL9 139 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 C2CD4DB7Z1M9 353 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ALG1L2C9J202 215 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 H3BMH7 237 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 HMGN4O00479 90 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 AQP7O14520 342 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 HS3ST1O14792 307 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SPINK4O60575 86 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 WDR1O75083 606 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 GPANK1O95872 356 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PIPP12273 146 aaPredicted RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 NID1P14543 1247 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 FABP4P15090 132 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 TAS2R31P59538 309 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 TAS2R30P59541 319 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 YPEL3P61236 119 aaPredicted RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ARG2P78540 354 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 OR5I1Q13606 314 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 EDDM3AQ14507 147 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 CEBPEQ15744 281 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 LINC00303Q3SY05 128 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SPATA31B1PQ5VZV4 182 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 RTL6Q6ICC9 239 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 WBP2NLQ6ICG8 309 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 FAM71E1Q6IPT2 247 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ABHD17CQ6PCB6 329 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 Q6ZRG5 221 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PLXDC1Q8IUK5 500 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 GBGT1Q8N5D6 347 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 VN1R2Q8NFZ6 395 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 OR2G3Q8NGZ4 309 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 STT3BQ8TCJ2 826 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PPP1R1CQ8WVI7 109 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PSMF1Q92530 271 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 RDH5Q92781 318 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 DDIT4LQ96D03 193 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 FER1L6-AS2Q96M78 137 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 FAM103A1Q9BTL3 118 aaKnown RBP3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SGPP1Q9BX95 441 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 ARV1Q9H2C2 271 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 C1orf198Q9H425 327 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 TAF9BQ9HBM6 251 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 FGF22Q9HCT0 170 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 HRASLSQ9HDD0 168 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 OBP2BQ9NPH6 170 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 PRSS16Q9NQE7 514 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 SMCO4Q9NRQ5 59 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 UQCC1Q9NVA1 299 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 GNG12Q9UBI6 72 aa3.23□□□□□ -1.89
PCDH11X-208ENST00000504220 V9GYS6 101 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms