RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ZNF286AQ9HBT8 521 aa18.21■□□□□ 0.5
UBE2D3-216ENST00000503742 AMDHD2Q9Y303 409 aa18.21■□□□□ 0.5
UBE2D3-216ENST00000503742 MSRB2Q9Y3D2 182 aa18.21■□□□□ 0.5
UBE2D3-216ENST00000503742 RPS2P15880 293 aaKnown RBP18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 TUBG1P23258 451 aa18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 CEACAM8P31997 349 aaPredicted RBP18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 MPV17P39210 176 aa18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 SEC61A1P61619 476 aaKnown RBP18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 IGFBP7Q16270 282 aa18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 TBR1Q16650 682 aa18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 ZNF474Q6S9Z5 364 aaPredicted RBP18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 ELMOD3Q96FG2 381 aa18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 ZNF488Q96MN9 340 aa18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 TUBG2Q9NRH3 451 aa18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 SLC25A15Q9Y619 301 aa18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 ANKRD11Q6UB99 2663 aaPredicted RBP18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 PRR14LQ5THK1 2151 aa18.2■□□□□ 0.5
UBE2D3-216ENST00000503742 A0A0B4J2A0 478 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 LRP5LA4QPB2 252 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 CCSO14618 274 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 NOS1APO75052 506 aaPredicted RBP18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 RHBDL1O75783 438 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 PRKACAP17612 351 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 P2RX3P56373 397 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 IL13RA2Q14627 380 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 SLC22A25Q6T423 547 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 CLEC18BQ6UXF7 455 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 Q6ZS49 121 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 RHOFQ9HBH0 211 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 SHPKQ9UHJ6 478 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 TRAV14DV4A0A0A6YYC5 116 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 IGHV1-18A0A0C4DH31 117 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 RFPL4AA6NLU0 287 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 RFPL4AL1F8VTS6 287 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 HOXD4P09016 255 aaPredicted RBP18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 SRSF7Q16629 238 aaKnown RBP eCLIP18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 TEX261Q6UWH6 196 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 UNQ6126/PRO20091Q6UXV3 157 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 FAM58AQ8N1B3 248 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 MARVELD3Q96A59 401 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 DHRS9Q9BPW9 319 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 ADAT1Q9BUB4 502 aaKnown RBP18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 U3KQ87 197 aa18.19■□□□□ 0.5
UBE2D3-216ENST00000503742 MPC2O95563 127 aa18.18■□□□□ 0.5
UBE2D3-216ENST00000503742 NAPSAO96009 420 aa18.18■□□□□ 0.5
UBE2D3-216ENST00000503742 TDGF1P3P51864 188 aa18.18■□□□□ 0.5
UBE2D3-216ENST00000503742 SORDQ00796 357 aa18.18■□□□□ 0.5
UBE2D3-216ENST00000503742 KCTD9Q7L273 389 aa18.18■□□□□ 0.5
UBE2D3-216ENST00000503742 Q8NA96 180 aa18.18■□□□□ 0.5
UBE2D3-216ENST00000503742 OR8H1Q8NGG4 311 aa18.18■□□□□ 0.5
UBE2D3-216ENST00000503742 ACACAQ13085 2346 aa18.18■□□□□ 0.5
UBE2D3-216ENST00000503742 DMXL2Q8TDJ6 3036 aa18.18■□□□□ 0.5
UBE2D3-216ENST00000503742 IGHV2OR16-5A0A0B4J2B6 119 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 CTSDP07339 412 aaPredicted RBP18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 PGAM2P15259 253 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 GMFBP60983 142 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 SCCPDHQ8NBX0 429 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 SFXN3Q9BWM7 321 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 BCL2L14Q9BZR8 327 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 IFT22Q9H7X7 185 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 SPACA1Q9HBV2 294 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 PURGQ9UJV8 347 aaKnown RBP18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 C14orf166Q9Y224 244 aaKnown RBP18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 DUSP1P28562 367 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 ESCO2Q56NI9 601 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 C3P1Q6ZMU1 363 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 WDR13Q9H1Z4 485 aa18.17■□□□□ 0.5
UBE2D3-216ENST00000503742 FXYD6-FXYD2A0A087WZ82 144 aa18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 L7N2F9 121 aa18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 KITLGP21583 273 aa18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 ERVK11-1P61568 191 aa18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 FGL1Q08830 312 aa18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 ZNF154Q13106 437 aa18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 OPCMLQ14982 345 aa18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 GTF3AQ92664 365 aaKnown RBP18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 FXYD6Q9H0Q3 95 aa18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 CLEC4MQ9H2X3 399 aaPredicted RBP18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 Q9N2K0 584 aa18.16■□□□□ 0.5
UBE2D3-216ENST00000503742 ARPC5O15511 151 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 GLAP06280 429 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 C4BPBP20851 252 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 SLC9A3R2Q15599 337 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 ANKRD55Q3KP44 614 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 TIMM23BQ5SRD1 257 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 ZNF680Q8NEM1 530 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 OR8G5Q8NG78 346 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 SEC22AQ96IW7 307 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 PDCD10Q9BUL8 212 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 DPCDQ9BVM2 203 aaPredicted RBP18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 CHMP1AQ9HD42 196 aaPredicted RBP18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 POLDIP2Q9Y2S7 368 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 DSPP15924 2871 aaKnown RBP18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 TRAV24A0A0B4J272 114 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 TMEM210A6NLX4 147 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 H0YL77 283 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 M0R233 179 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 GLI4P10075 376 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 OR8G1Q15617 311 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 CCDC28AQ8IWP9 274 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 Q8IYB0 196 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms