RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 TRAPPC1Q9Y5R8 145 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 SOCS1O15524 211 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 PTP4A3O75365 173 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 UBALD1Q8TB05 177 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 LOXL4Q96JB6 756 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 LPAR3Q9UBY5 353 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 PILRAQ9UKJ1 303 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 MPC1Q9Y5U8 109 aa14.26□□□□□ -0.13
HMGXB3-202ENST00000503427 IGKV1-8A0A0C4DH67 115 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 SEC14L6B5MCN3 397 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 PRR27Q6MZM9 219 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 VASH2Q86V25 355 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 UBAC2Q8NBM4 344 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 OR13G1Q8NGZ3 307 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 ACTL6AO96019 429 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 BGLAPP02818 100 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 ATP6V1FQ16864 119 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 TMEM52Q8NDY8 209 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 OR10AC1Q8NH08 325 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 FBLIM1Q8WUP2 373 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 WDR13Q9H1Z4 485 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 LANCL1O43813 399 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 FABP4P15090 132 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 GGTLC2Q14390 218 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 OR2Z1Q8NG97 314 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 ACY3Q96HD9 319 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 BRWD1Q9NSI6 2320 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 DBX1A6NMT0 343 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 VMA21Q3ZAQ7 101 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 C9orf152Q5JTZ5 239 aa14.25□□□□□ -0.13
HMGXB3-202ENST00000503427 SPINK14Q6IE38 97 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 CXorf67Q86X51 503 aaPredicted RBP14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 OR10D4PQ8NGN7 298 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 RNF133Q8WVZ7 376 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 TMEM56Q96MV1 263 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 GALR1P47211 349 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 C9orf40Q8IXQ3 194 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 STARD10Q9Y365 291 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 SERTM2A0A1B0GWG4 89 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 DNPH1O43598 174 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 SPRY3O43610 288 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 FCGR3BO75015 233 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 HSBP1O75506 76 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 MMP16P51512 607 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 KRTDAPP60985 99 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 HES4Q9HCC6 221 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 ZNF737O75373 536 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 MICBQ29980 383 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 LIAT1Q6ZQX7 453 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 ZNF721Q8TF20 911 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 TMEM37Q8WXS4 190 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 FAM210BQ96KR6 192 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 ARL2-SNX15V9GYD0 113 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 LTBP1Q14766 1721 aa14.24□□□□□ -0.13
HMGXB3-202ENST00000503427 ARID1AO14497 2285 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 IFI6P09912 130 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 ACAA2P42765 397 aaKnown RBP14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 RAB7AP51149 207 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 TIMM9Q9Y5J7 89 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 RBFOX3A6NFN3 312 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 MBPP02686 304 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 HLA-DRB3P79483 266 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 IQCJQ1A5X6 159 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 ALX4Q9H161 411 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 PSG11Q9UQ72 335 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 ZFC3H1O60293 1989 aaKnown RBP14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 C1QCP02747 245 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 ZNF250P15622 560 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 POLR2GP62487 172 aaKnown RBP eCLIP14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 PNRC1Q12796 327 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 OR6S1Q8NH40 331 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 SEC11CQ9BY50 192 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 PCM1Q15154 2024 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 BRCA1P38398 1863 aaKnown RBP14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 NGFRP08138 427 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 PATE4P0C8F1 98 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 LRRC10Q5BKY1 277 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 SFTPA2Q8IWL1 248 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 TMEM230Q96A57 120 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 PTX4Q96A99 478 aa14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 NEIL1Q96FI4 390 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-202ENST00000503427 NDUFB3O43676 98 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 FAM3AP98173 230 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 ALKBH6Q3KRA9 238 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 TMEM211Q6ICI0 200 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 SLC36A1Q7Z2H8 476 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 TRMT61AQ96FX7 289 aaKnown RBP14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 SLC45A2Q9UMX9 530 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 CST2P09228 141 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 F2RP25116 425 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 C19orf57Q0VDD7 668 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 TMEM147Q9BVK8 224 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 BARX1Q9HBU1 254 aaPredicted RBP14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 FGF2P09038 288 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 KIR2DS2P43631 304 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 COL19A1Q14993 1142 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 STUMQ69YW2 141 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 RFESDQ8TAC1 157 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 APOBEC4Q8WW27 367 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms