RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 TNFSF8P32971 234 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 TMEM50BP56557 158 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 KCNJ8Q15842 424 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 PHF21AQ96BD5 680 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 CCL13Q99616 98 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 ADAM30Q9UKF2 790 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 MAP1AP78559 2803 aaPredicted RBP17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 TNFRSF13BO14836 293 aaPredicted RBP17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 CSF3P09919 207 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 CDK2P24941 298 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 ATAD3CQ5T2N8 411 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 OR10R2Q8NGX6 335 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 DIRAS2Q96HU8 199 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 SEBOXQ9HB31 216 aaPredicted RBP17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 DIABLOQ9NR28 239 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 METRNQ9UJH8 293 aa17.04■□□□□ 0.32
CDC42SE2-206ENST00000503291 FOXI3A8MTJ6 420 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 SIRPB1O00241 398 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 COL10A1Q03692 680 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 ATPAF1Q5TC12 328 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 RAB12Q6IQ22 244 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 BRICD5Q6PL45 260 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 C10orf105Q8TEF2 133 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 BPESC1Q9GZL8 116 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 IFT22Q9H7X7 185 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 TRAV24A0A0B4J272 114 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 NDUFS8O00217 210 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 NDUFA2O43678 99 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 FUT3P21217 361 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 LMO1P25800 156 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 PLAC9Q5JTB6 97 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 CNIH2Q6PI25 160 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 LYPD2Q6UXB3 125 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 ZNF788Q6ZQV5 615 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 DNM1P46Q6ZS02 220 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 MUC20Q8N307 709 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 CHST4Q8NCG5 386 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 OR4M1Q8NGD0 313 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 CYYR1Q96J86 154 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 WDFY2Q96P53 400 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 NEDD4LQ96PU5 975 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 EXTL2Q9UBQ6 330 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 MAB21L2Q9Y586 359 aa17.03■□□□□ 0.32
CDC42SE2-206ENST00000503291 SLC33A1O00400 549 aaPredicted RBP17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 TMPRSS2O15393 492 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 XRCC3O43542 346 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 SCGNO76038 276 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 CLEC12BQ2HXU8 276 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 NKAPLQ5M9Q1 402 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 DCDC5Q6ZRR9 648 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 Q6ZTK2 550 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 C6orf201Q7Z4U5 140 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 RTN4RL2Q86UN3 420 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 IZUMO1Q8IYV9 350 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 ZNRF1Q8ND25 227 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 RAB3CQ96E17 227 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 SDSLQ96GA7 329 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 ARHGAP5-AS1Q96IT6 56 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 DNTTIP1Q9H147 329 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 ZNF665Q9H7R5 613 aa17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 ZMAT3Q9HA38 289 aaKnown RBP17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 RCC2Q9P258 522 aaKnown RBP17.02■□□□□ 0.32
CDC42SE2-206ENST00000503291 FLNBO75369 2602 aaKnown RBP17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 A0A0A6YYH2 397 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 A6NJ64 397 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 HSPB6O14558 160 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 PSPNO60542 156 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 PDCD6O75340 191 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 CHATP28329 748 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 TALDO1P37837 337 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 DSCR9P59020 149 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 MADCAM1Q13477 382 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 TMEM155Q4W5P6 130 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 ZNF561Q8N587 486 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 SUMF2Q8NBJ7 301 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 GAFA1Q96PS6 74 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 PIMREGQ9BSJ6 248 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 NARFLQ9H6Q4 476 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 SPACA1Q9HBV2 294 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 PLEKHJ1Q9NW61 149 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 TRAV18A0A075B6X5 111 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 A0A1B0GW55 424 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 CEACAM18A8MTB9 384 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 H3BUI4 141 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 ADAM20O43506 726 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 DUX4L2P0CJ85 424 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 DUX4L3P0CJ86 424 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 DUX4L4P0CJ87 422 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 DUX4L5P0CJ88 424 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 DUX4L6P0CJ89 424 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 DUX4L7P0CJ90 424 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 TMEM69Q5SWH9 247 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 DUX4L9Q6RFH8 374 aaPredicted RBP17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 C17orf107Q6ZR85 190 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 BPIFB2Q8N4F0 458 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 ASCC1Q8N9N2 400 aaKnown RBP17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 FAAP24Q9BTP7 215 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 DUX4Q9UBX2 424 aa17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 MRPS7Q9Y2R9 242 aaKnown RBP17.01■□□□□ 0.31
CDC42SE2-206ENST00000503291 CSMD1Q96PZ7 3565 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms