RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MTCP1P56278 107 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 SUMO1P63165 101 aaKnown RBP10.01□□□□□ -0.81
USP46-204ENST00000503060 FAM3AP98173 230 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 ZNF92Q03936 586 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 LGALSLQ3ZCW2 172 aaPredicted RBP10.01□□□□□ -0.81
USP46-204ENST00000503060 TMEM42Q69YG0 159 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 TMPRSS7Q7RTY8 843 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 NUFIP2Q7Z417 695 aaKnown RBP10.01□□□□□ -0.81
USP46-204ENST00000503060 CFHR4Q92496 578 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 RRNAD1Q96FB5 475 aaKnown RBP10.01□□□□□ -0.81
USP46-204ENST00000503060 CYYR1Q96J86 154 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 C1QTNF5Q9BXJ0 243 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 PRDM14Q9GZV8 571 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 DNTTIP1Q9H147 329 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 ELL3Q9HB65 397 aaPredicted RBP10.01□□□□□ -0.81
USP46-204ENST00000503060 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.01□□□□□ -0.81
USP46-204ENST00000503060 SPRR3Q9UBC9 169 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 VSIG4Q9Y279 399 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 TRGV5A0A0B4J1U4 118 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 XRCC2O43543 280 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 IFNA4P05014 189 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 TNFSF10P50591 281 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 ARFRP1Q13795 201 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 TMEM17Q86X19 198 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 NHLRC2Q8NBF2 726 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 UXS1Q8NBZ7 420 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 OR4K15Q8NH41 348 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 MRGPRDQ8TDS7 321 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 NEK7Q8TDX7 302 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 WDR89Q96FK6 387 aaPredicted RBP10.01□□□□□ -0.81
USP46-204ENST00000503060 CPNE2Q96FN4 548 aaPredicted RBP10.01□□□□□ -0.81
USP46-204ENST00000503060 WDYHV1Q96HA8 205 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 OCSTAMPQ9BR26 566 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 SLC23A1Q9UHI7 598 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 TP53TG5Q9Y2B4 290 aa10.01□□□□□ -0.81
USP46-204ENST00000503060 IGKV1-27A0A075B6S5 117 aa10□□□□□ -0.81
USP46-204ENST00000503060 GOSR2O14653 212 aa10□□□□□ -0.81
USP46-204ENST00000503060 SIX6O95475 246 aa10□□□□□ -0.81
USP46-204ENST00000503060 NRASP01111 189 aa10□□□□□ -0.81
USP46-204ENST00000503060 HLA-HP01893 362 aa10□□□□□ -0.81
USP46-204ENST00000503060 PMP2P02689 132 aa10□□□□□ -0.81
USP46-204ENST00000503060 TMEM225BP0DP42 221 aa10□□□□□ -0.81
USP46-204ENST00000503060 BLVRBP30043 206 aaPredicted RBP10□□□□□ -0.81
USP46-204ENST00000503060 HLXQ14774 488 aaPredicted RBP10□□□□□ -0.81
USP46-204ENST00000503060 OR8B8Q15620 311 aa10□□□□□ -0.81
USP46-204ENST00000503060 TOR2AQ5JU69 321 aa10□□□□□ -0.81
USP46-204ENST00000503060 C17orf107Q6ZR85 190 aa10□□□□□ -0.81
USP46-204ENST00000503060 ZNF767PQ75MW2 155 aa10□□□□□ -0.81
USP46-204ENST00000503060 FTMTQ8N4E7 242 aa10□□□□□ -0.81
USP46-204ENST00000503060 C12orf45Q8N5I9 185 aaPredicted RBP10□□□□□ -0.81
USP46-204ENST00000503060 ZDHHC22Q8N966 263 aa10□□□□□ -0.81
USP46-204ENST00000503060 EDARADDQ8WWZ3 215 aa10□□□□□ -0.81
USP46-204ENST00000503060 PECRQ9BY49 303 aa10□□□□□ -0.81
USP46-204ENST00000503060 ZDHHC11Q9H8X9 412 aa10□□□□□ -0.81
USP46-204ENST00000503060 HSF4Q9ULV5 492 aa10□□□□□ -0.81
USP46-204ENST00000503060 CSAG2Q9Y5P2 127 aa10□□□□□ -0.81
USP46-204ENST00000503060 ZNF407Q9C0G0 2248 aa10□□□□□ -0.81
USP46-204ENST00000503060 LOC100509620A0A075B734 347 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 PLSCR5A0PG75 271 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 M0QZK8 103 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 CCL11P51671 97 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 H2BFSP57053 126 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 DHODHQ02127 395 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 TCF15Q12870 199 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 MPPED2Q15777 294 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 MICBQ29980 383 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 BORCS8Q96FH0 119 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 PERPQ96FX8 193 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 PKIBQ9C010 78 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 F5H5P2 479 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 K7EQM0 130 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 SLC33A1O00400 549 aaPredicted RBP9.99□□□□□ -0.81
USP46-204ENST00000503060 ARPC5O15511 151 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 ZNF35P13682 527 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 WT1P19544 449 aaPredicted RBP9.99□□□□□ -0.81
USP46-204ENST00000503060 RBP2P50120 134 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 ARL6IP1Q15041 203 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 VAX1Q5SQQ9 334 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 SLC25A42Q86VD7 318 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 BCL2L2Q92843 193 aaPredicted RBP9.99□□□□□ -0.81
USP46-204ENST00000503060 Q96M66 194 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 OPN4Q9UHM6 478 aa9.99□□□□□ -0.81
USP46-204ENST00000503060 DNAJC13O75165 2243 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 ZNF816-ZNF321PA0A0X1KG74 233 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 ZNF503-AS2A6NEH8 195 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 SPRY1O43609 319 aaPredicted RBP9.98□□□□□ -0.81
USP46-204ENST00000503060 ANGPTL7O43827 346 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 CA11O75493 328 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 S100A8P05109 93 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 ARF6P62330 175 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 DHRS2Q13268 280 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 DCAF12L2Q5VW00 463 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 VWA1Q6PCB0 445 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 MYO7BQ6PIF6 2116 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 ASCL4Q6XD76 172 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 MOB3CQ70IA8 216 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 HOGA1Q86XE5 327 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 FDCSPQ8NFU4 85 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 TMPRSS13Q9BYE2 586 aa9.98□□□□□ -0.81
USP46-204ENST00000503060 HEXA-AS1Q9H8Q6 139 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms