RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HMG20AQ9NP66 347 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 KRT84Q9NSB2 600 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF580Q9UK33 172 aa4.87□□□□□ -1.63
LSM3P4-201ENST00000502948 COL7A1Q02388 2944 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 TRGV10A0A0A0MS01 117 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 TCRBV4S1A1TA0A5B7 111 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 METTL15A6NJ78 407 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF729A6NN14 1252 aaPredicted RBP4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 BUB1B-PAK6H3BSN5 160 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 SH2D1BO14796 132 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 RAMP3O60896 148 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 ENTPD6O75354 484 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 ZFPL1O95159 310 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 PF4P02776 101 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 PRB2P02812 416 aaPredicted RBP4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 MRPL3P09001 348 aaKnown RBP4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 NHLRC4P0CG21 123 aaPredicted RBP4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 CGB3P0DN86 165 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 CGB7P0DN87 165 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 PIPP12273 146 aaPredicted RBP4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 IGLL1P15814 213 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 PRKACGP22612 351 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 HTR1FP30939 366 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 MYCNOSP40205 109 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 MNDAP41218 407 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 OR3A1P47881 315 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 KCNJ3P48549 501 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 CCR9P51686 369 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 PRRX1P54821 245 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 GNGT1P63211 74 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 PDZK1IP1Q13113 114 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 DYNC1I2Q13409 638 aaKnown RBP4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 FLOT2Q14254 428 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 HLA-DRB5Q30154 266 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 KIAA2026Q5HYC2 2103 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 DMRTC1Q5HYR2 192 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 SLC25A30Q5SVS4 291 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 ELP2Q6IA86 826 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 SLC25A26Q70HW3 274 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 HS3ST5Q8IZT8 346 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 LINC00482Q8N8I6 264 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 Q8NFD4 153 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 OR8J1Q8NGP2 316 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 NDNFQ8TB73 568 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 DPF1Q92782 380 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 EMG1Q92979 244 aaKnown RBP4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 STMN2Q93045 179 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 RFKQ969G6 155 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 MYDGFQ969H8 173 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 CCDC124Q96CT7 223 aaKnown RBP4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 MYCBPQ99417 103 aaPredicted RBP4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 SLC25A33Q9BSK2 321 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 ADI1Q9BV57 179 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 INPP5EQ9NRR6 644 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 OR6C3Q9NZP0 311 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 POMPQ9Y244 141 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 HILPDAQ9Y5L2 63 aa4.86□□□□□ -1.63
LSM3P4-201ENST00000502948 IGKV1-9A0A0C4DH69 117 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 KBTBD11-OT1A0A1B0GTJ5 212 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM230AA0A1W2PPH8 454 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 A0A1W2PQL4 384 aaPredicted RBP4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 NPIPB11E5RHQ5 1161 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 G3V2T6 193 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 H0YHG0 523 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 J3QRE1 110 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 INMTO95050 263 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 MPIG6BO95866 241 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 OR2H2O95918 312 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 IGHG2P01859 326 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 IGHA1P01876 353 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM106CPP0CH98 169 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 DBTP11182 482 aaKnown RBP4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 ATF1P18846 271 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 PTGFRP43088 359 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 NPBWR2P48146 333 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 THBS3P49746 956 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 RAB7AP51149 207 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 MTCP1P56278 107 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 MRPL28Q13084 256 aaKnown RBP4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 EBI3Q14213 229 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 KPNB1Q14974 876 aaKnown RBP4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 Q3ZCU0 254 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 ABCA11PQ4W5N1 156 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 ARSJQ5FYB0 599 aaPredicted RBP4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 TPTE2P1Q5T6R2 138 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 MRPL41Q8IXM3 137 aaKnown RBP4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 OR8H3Q8N146 312 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 LYG1Q8N1E2 194 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 PRSS35Q8N3Z0 413 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 TCEANCQ8N8B7 351 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 YIPF7Q8N8F6 280 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 RNF152Q8N8N0 203 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 C8orf31Q8N9H6 132 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF565Q8N9K5 539 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 CCDC197Q8NCU1 140 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 OR4D6Q8NGJ1 314 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 OR51T1Q8NGJ9 327 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 OR9G1Q8NH87 305 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 HAVCR2Q8TDQ0 301 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 CHPT1Q8WUD6 406 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms