RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 ST3GAL6Q9Y274 331 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 ZNF256Q9Y2P7 627 aaPredicted RBP3.09□□□□□ -1.92
SUB1-202ENST00000502453 BRCA2P51587 3418 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 COL24A1Q17RW2 1714 aa3.09□□□□□ -1.92
SUB1-202ENST00000502453 ABCC3O15438 1527 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 A0A096LPI6 279 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 ZNF814B7Z6K7 855 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 TOMM40O96008 361 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 FGF1P05230 155 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 OR5AL1P0C617 328 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 SPINK2P20155 84 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 PTGDSP41222 190 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 RAB25P57735 213 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 PFN3P60673 137 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 RPL24P83731 157 aaKnown RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 PRSS8Q16651 343 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 FHL5Q5TD97 284 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 SMARCD3Q6STE5 483 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 TMPPEQ6ZT21 453 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 FAM19A5Q7Z5A7 132 aaPredicted RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 SLC37A2Q8TED4 501 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 RXFP2Q8WXD0 754 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 DENND4BO75064 1496 aaPredicted RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 IGKV1D-8A0A087WSZ0 117 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 A0A0G2JLM5 398 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 COPEO14579 308 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 MRPS12O15235 138 aaKnown RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 LYPLA1O75608 230 aaPredicted RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 STK16O75716 305 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 PGA4P0DJD7 388 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 PGA3P0DJD8 388 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 GGT2P36268 569 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 MFAP2P55001 183 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 RND3P61587 244 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 OR7A5Q15622 319 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 BAP18Q8IXM2 172 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 ZNF567Q8N184 647 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 C12orf45Q8N5I9 185 aaPredicted RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 OR52E2Q8NGJ4 325 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 CYGBQ8WWM9 190 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 FAM168AQ92567 244 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 GALMQ96C23 342 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 RPUSD4Q96CM3 377 aaKnown RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 DDIT4LQ96D03 193 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 TMPRSS5Q9H3S3 457 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 RAB22AQ9UL26 194 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 TP53TG1Q9Y2A0 90 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 RTEL1-TNFRSF6BF6WH68 1400 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 TNS3Q68CZ2 1445 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 A0A1W2PRE2 83 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 GAGE12JA6NER3 117 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 INAFM1C9JVW0 142 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 H7C417 338 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 I3L521 148 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 K7EQS6 105 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 ORC5O43913 435 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 FOXH1O75593 365 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 MMP23AO75900 390 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 SEMA4FO95754 770 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 SPRP35270 261 aaPredicted RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 PTH2RP49190 550 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 DEFA1P59665 94 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 SLC35A2P78381 396 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 FMODQ06828 376 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 FOXI1Q12951 378 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 GAGE5Q13069 117 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 GAGE6Q13070 117 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 LRRC26Q2I0M4 334 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 TMEM97Q5BJF2 176 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 TMEM215Q68D42 235 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 OGFOD2Q6N063 350 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 RBM23Q86U06 439 aaKnown RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 TMEM86BQ8N661 226 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 SYT8Q8NBV8 401 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 SLC30A7Q8NEW0 376 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 Q8TCH9 128 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 HIST1H2BAQ96A08 127 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 GMPPAQ96IJ6 420 aaPredicted RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 PLAC1Q9HBJ0 212 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 AURKAIP1Q9NWT8 199 aaPredicted RBP3.08□□□□□ -1.92
SUB1-202ENST00000502453 EHFQ9NZC4 300 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 COMMD9Q9P000 198 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 IL36RNQ9UBH0 155 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 RIMS3Q9UJD0 308 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 FER1L5A0AVI2 2057 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 MYH2Q9UKX2 1941 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 ZSWIM8A7E2V4 1837 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 SHANK3Q9BYB0 1731 aa3.08□□□□□ -1.92
SUB1-202ENST00000502453 LOC100131303A0A0U1RQF7 123 aa3.07□□□□□ -1.92
SUB1-202ENST00000502453 F5H5K5 113 aa3.07□□□□□ -1.92
SUB1-202ENST00000502453 K7ESM1 405 aa3.07□□□□□ -1.92
SUB1-202ENST00000502453 TYROBPO43914 113 aa3.07□□□□□ -1.92
SUB1-202ENST00000502453 DHRS3O75911 302 aa3.07□□□□□ -1.92
SUB1-202ENST00000502453 FOLR2P14207 255 aa3.07□□□□□ -1.92
SUB1-202ENST00000502453 CD99P14209 185 aa3.07□□□□□ -1.92
SUB1-202ENST00000502453 SNRPD1P62314 119 aaKnown RBP3.07□□□□□ -1.92
SUB1-202ENST00000502453 NAA40Q86UY6 237 aa3.07□□□□□ -1.92
SUB1-202ENST00000502453 MUC15Q8N387 334 aa3.07□□□□□ -1.92
SUB1-202ENST00000502453 ZNF740Q8NDX6 193 aa3.07□□□□□ -1.92
SUB1-202ENST00000502453 OR1N2Q8NGR9 330 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms