RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 MPIG6BO95866 241 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 SLC2A2P11168 524 aaPredicted RBP16.67■□□□□ 0.26
CTSD-206ENST00000497544 MGMTP16455 207 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 PITPNBP48739 271 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 GNB2P62879 340 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 COL10A1Q03692 680 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 LRRC10Q5BKY1 277 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 SFXN4Q6P4A7 337 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 USP43Q70EL4 1123 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 ZNF561Q8N587 486 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 FAM216BQ8N7L0 139 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 SDSLQ96GA7 329 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 SELENOIQ9C0D9 397 aa16.67■□□□□ 0.26
CTSD-206ENST00000497544 HAX1O00165 279 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 SIGLEC5O15389 551 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 VSIG8P0DPA2 414 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 ZNF44P15621 663 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 CFPP27918 469 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 NPY4RP50391 375 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 RBM11P57052 281 aaKnown RBP16.66■□□□□ 0.26
CTSD-206ENST00000497544 IKZF1Q13422 519 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 IL13RA2Q14627 380 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 TMEM249Q2WGJ8 235 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 PIGYQ3MUY2 71 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 IDNKQ5T6J7 187 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 OR10K2Q6IF99 312 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 OR2W3Q7Z3T1 314 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 ZNRF1Q8ND25 227 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 FAM46BQ96A09 425 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 SSBP3Q9BWW4 388 aaPredicted RBP16.66■□□□□ 0.26
CTSD-206ENST00000497544 DCSTAMPQ9H295 470 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 LIN7BQ9HAP6 207 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 CTSZQ9UBR2 303 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 CLN8Q9UBY8 286 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 MAB21L2Q9Y586 359 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 CEPT1Q9Y6K0 416 aa16.66■□□□□ 0.26
CTSD-206ENST00000497544 ARHGAP32A7KAX9 2087 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 A0A1B0GW55 424 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 DVL1O14640 695 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 FOXH1O75593 365 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 OR2H2O95918 312 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 DUX4L2P0CJ85 424 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 DUX4L3P0CJ86 424 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 DUX4L4P0CJ87 422 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 DUX4L5P0CJ88 424 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 DUX4L6P0CJ89 424 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 DUX4L7P0CJ90 424 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 GZMKP49863 264 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 PDCD1Q15116 288 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 TAF9Q16594 264 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 NHLRC3Q5JS37 347 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 WDR25Q64LD2 544 aaPredicted RBP16.65■□□□□ 0.26
CTSD-206ENST00000497544 DUX4L9Q6RFH8 374 aaPredicted RBP16.65■□□□□ 0.26
CTSD-206ENST00000497544 ASCC1Q8N9N2 400 aaKnown RBP16.65■□□□□ 0.26
CTSD-206ENST00000497544 TMEM104Q8NE00 496 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 TMEM185AQ8NFB2 350 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 PPP1R35Q8TAP8 253 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 SNX22Q96L94 193 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 URM1Q9BTM9 101 aaKnown RBP16.65■□□□□ 0.26
CTSD-206ENST00000497544 TMEM59Q9BXS4 323 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 KCNK15Q9H427 330 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 DUX4Q9UBX2 424 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 METRNQ9UJH8 293 aa16.65■□□□□ 0.26
CTSD-206ENST00000497544 TMEM14DPA8MWL7 114 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 B4DSR2 109 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 FAM157AC9JC47 383 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 SIRPB1O00241 398 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 TMEM127O75204 238 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 SEC61A1P61619 476 aaKnown RBP16.64■□□□□ 0.25
CTSD-206ENST00000497544 MPV17LQ2QL34 196 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 Q6P435 159 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 ZNF841Q6ZN19 808 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 LINC00596Q86U02 117 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 CHST4Q8NCG5 386 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 OR5D13Q8NGL4 314 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 ST8SIA4Q92187 359 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 ISOC1Q96CN7 298 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 MRI1Q9BV20 369 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 SLC25A10Q9UBX3 287 aaPredicted RBP16.64■□□□□ 0.25
CTSD-206ENST00000497544 RAB22AQ9UL26 194 aa16.64■□□□□ 0.25
CTSD-206ENST00000497544 A0A0B4J203 849 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 TMEM272A0A1B0GTI8 110 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 H3BUI4 141 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 GEMIN2O14893 280 aaKnown RBP16.63■□□□□ 0.25
CTSD-206ENST00000497544 PHF1O43189 567 aaPredicted RBP16.63■□□□□ 0.25
CTSD-206ENST00000497544 OR7C1O76099 320 aaPredicted RBP16.63■□□□□ 0.25
CTSD-206ENST00000497544 SELLP14151 372 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 NDUFB7P17568 137 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 GABRR1P24046 479 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 LMO1P25800 156 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 RORCP51449 518 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 QRFPP83859 136 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 UNC119Q13432 240 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 CYB5R2Q6BCY4 276 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 LINC01356Q8N9X3 169 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 NDNFQ8TB73 568 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 SLC25A46Q96AG3 418 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 C1orf159Q96HA4 380 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 Q96M66 194 aa16.63■□□□□ 0.25
CTSD-206ENST00000497544 FAM234AQ9H0X4 552 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms