RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 OR3A4PP47883 348 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 COMPP49747 757 aaPredicted RBP13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 UBE2E1P51965 193 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 BDH1Q02338 343 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 ELP2Q6IA86 826 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 TPRX1Q8N7U7 411 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 MYDGFQ969H8 173 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 CHST6Q9GZX3 395 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 VCX3BQ9H321 246 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 NEK6Q9HC98 313 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 NOX4Q9NPH5 578 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 TMEM138Q9NPI0 162 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 ERGIC3Q9Y282 383 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 GSTK1Q9Y2Q3 226 aa13.17□□□□□ -0.3
DNMT3A-215ENST00000496570 A0A1W2PRD5 423 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 A0A1W2PRF3 423 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 A0A1W2PRM7 423 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 SIRPB1O00241 398 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 NPFFO15130 113 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 CRHBPP24387 322 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 GP2P55259 537 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 EDDM3BP56851 147 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 GUCA2AQ02747 115 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 INSL4Q14641 139 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 GRK1Q15835 563 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 FIP1L1Q6UN15 594 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 SATL1Q86VE3 508 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 LYPD6Q86Y78 171 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 LDLRAD3Q86YD5 345 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 OR5D13Q8NGL4 314 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 TNFAIP8L1Q8WVP5 186 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 C17orf50Q8WW18 174 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 TAF15Q92804 592 aaKnown RBP eCLIP13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 DERL3Q96Q80 235 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 MND1Q9BWT6 205 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 ZMAT3Q9HA38 289 aaKnown RBP13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 SCN3BQ9NY72 215 aa13.16□□□□□ -0.3
DNMT3A-215ENST00000496570 A0A0G2JK05 382 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 A0A1W2PPK0 400 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 SLC33A1O00400 549 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 SH2D1BO14796 132 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 GABRR1P24046 479 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 BDKRB2P30411 391 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 PTGFRP43088 359 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 HSPA13P48723 471 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 MTNR1BP49286 362 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 BLMHQ13867 455 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 EDDM3AQ14507 147 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 DDI2Q5TDH0 399 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 NCR3LG1Q68D85 454 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 GDPD3Q7L5L3 318 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 OR51T1Q8NGJ9 327 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 OR10K1Q8NGX5 313 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 TBC1D15Q8TC07 691 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 EXOSC4Q9NPD3 245 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 ZNF581Q9P0T4 197 aa13.15□□□□□ -0.3
DNMT3A-215ENST00000496570 MGST3O14880 152 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 MAGEB3O15480 346 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 CDRT1O95170 752 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 HKR1P10072 659 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 ERP29P30040 261 aaKnown RBP13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 SAA4P35542 130 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 ZNF93P35789 620 aaPredicted RBP13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 TGFBR2P37173 567 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 IER3P46695 156 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 PPP3R1P63098 170 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 ACTG1P63261 375 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 MEF2CQ06413 473 aaPredicted RBP13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 SPHARQ15513 63 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 UNQ9370/PRO34162Q6UXP9 181 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 ZDHHC16Q969W1 377 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 SLC25A28Q96A46 364 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 COQ2Q96H96 371 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 GPER1Q99527 375 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 ZNF184Q99676 751 aaPredicted RBP13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 CHIAQ9BZP6 476 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 IL36GQ9NZH8 169 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 ZNRD1Q9P1U0 126 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 RAB26Q9ULW5 256 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 TPRKBQ9Y3C4 175 aa13.14□□□□□ -0.31
DNMT3A-215ENST00000496570 TRAV24A0A0B4J272 114 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 A0A1W2PPH5 198 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 SC5DO75845 299 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 IGHV4-59P01825 116 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 ZNF728P0DKX0 622 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 VHLP40337 213 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 P2RX3P56373 397 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 PIGYQ3MUY2 71 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 C16orf87Q6PH81 154 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 ZNF782Q6ZMW2 699 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 TMEM86BQ8N661 226 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 CPNE2Q96FN4 548 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 PPA2Q9H2U2 334 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 GLS2Q9UI32 602 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 FOXJ3Q9UPW0 622 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 LINC00312Q9Y6C7 94 aa13.13□□□□□ -0.31
DNMT3A-215ENST00000496570 MEIOCA2RUB1 952 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 RGS10O43665 173 aa13.12□□□□□ -0.31
DNMT3A-215ENST00000496570 RBP4P02753 201 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms