RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 SLC30A8Q8IWU4 369 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 ZNF679Q8IYX0 411 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 OFCC1Q8IZS5 231 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 OR2Z1Q8NG97 314 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 ZNF420Q8TAQ5 688 aaPredicted RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 TMEM239Q8WW34 195 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 SLC7A6Q92536 515 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 PHYHIPQ92561 330 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 SGTBQ96EQ0 304 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 PRRC1Q96M27 445 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 OR2V2Q96R30 315 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 TBX15Q96SF7 602 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 CGREF1Q99674 301 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 FUNDC2Q9BWH2 189 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 PARD6BQ9BYG5 372 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 POLR2J2Q9GZM3 115 aaKnown RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 POLR2J3Q9H1A7 115 aaKnown RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 TXNIPQ9H3M7 391 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 CENPHQ9H3R5 247 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 FNDC4Q9H6D8 234 aaPredicted RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 MARCH7Q9H992 704 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 NANOGQ9H9S0 305 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 STX18Q9P2W9 335 aaKnown RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 ATPIF1Q9UII2 106 aa3.43□□□□□ -1.86
VPS52-222ENST00000495981 DIMT1Q9UNQ2 313 aaKnown RBP3.43□□□□□ -1.86
VPS52-222ENST00000495981 PKHD1P08F94 4074 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 ANKRD30BLA7E2S9 258 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 C12orf71A8MTZ7 269 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 IQCF6A8MYZ5 107 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 FAM220BPB1ANY3 271 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 BLOC1S5-TXNDC5H3BN57 136 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 M0QX08 132 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 CDC42EP2O14613 210 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 CHEK1O14757 476 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 PHYHO14832 338 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 FFAR1O14842 300 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 SGCEO43556 437 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 CLPXO76031 633 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 CYB5R3P00387 301 aaPredicted RBP3.42□□□□□ -1.86
VPS52-222ENST00000495981 ACAA1P09110 424 aaPredicted RBP3.42□□□□□ -1.86
VPS52-222ENST00000495981 RRASP10301 218 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 PSKH1P11801 424 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 NR2C1P13056 603 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 PAICSP22234 425 aaKnown RBP3.42□□□□□ -1.86
VPS52-222ENST00000495981 GLRA1P23415 457 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 CFHR2P36980 270 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 PMELP40967 661 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 GPR4P46093 362 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 FXYD6P3P58550 94 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 TAS2R41P59536 307 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 FGF12P61328 243 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 RPL27P61353 136 aaKnown RBP3.42□□□□□ -1.86
VPS52-222ENST00000495981 SPIBQ01892 262 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 SCRN3Q0VDG4 424 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 AQP6Q13520 282 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 KRR1Q13601 381 aaKnown RBP3.42□□□□□ -1.86
VPS52-222ENST00000495981 MOGQ16653 247 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 LRRC37A5PQ49AS3 106 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 WDR25Q64LD2 544 aaPredicted RBP3.42□□□□□ -1.86
VPS52-222ENST00000495981 OLFML2AQ68BL7 652 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 FBXW12Q6X9E4 464 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 RBMS3Q6XE24 437 aaKnown RBP3.42□□□□□ -1.86
VPS52-222ENST00000495981 TSEN54Q7Z6J9 526 aaKnown RBP3.42□□□□□ -1.86
VPS52-222ENST00000495981 NRMQ8IXM6 262 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 C1orf174Q8IYL3 243 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 MICU2Q8IYU8 434 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 TMEM86BQ8N661 226 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 SLC37A3Q8NCC5 494 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 OR52E2Q8NGJ4 325 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 OR6M1Q8NGM8 313 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 OR13C3Q8NGS6 347 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 OR4F5Q8NH21 305 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 OR10A6Q8NH74 314 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 GPR148Q8TDV2 347 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 RASD2Q96D21 266 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 GPX7Q96SL4 187 aaPredicted RBP3.42□□□□□ -1.86
VPS52-222ENST00000495981 SH3GL1Q99961 368 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 SLC30A2Q9BRI3 323 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 TMEM246Q9BRR3 403 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 TMBIM4Q9HC24 238 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 RDH8Q9NYR8 311 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 IL20Q9NYY1 176 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 B9D1Q9UPM9 204 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 PPP1R3CQ9UQK1 317 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 LHFPL6Q9Y693 200 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 DNAH11Q96DT5 4516 aa3.42□□□□□ -1.86
VPS52-222ENST00000495981 TET2Q6N021 2002 aaPredicted RBP3.41□□□□□ -1.86
VPS52-222ENST00000495981 IGLV1-36A0A0B4J1U3 117 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 TRBV4-1A0A0J9YWV2 114 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 IGHV3-64DA0A0J9YX35 117 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 KIR2DS1A0A191URI9 304 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 A0A1B0GUS0 222 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 A0A1B0GW55 424 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 CLPSL1A2RUU4 121 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 PRSS37A4D1T9 235 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 C5orf63A6NC05 138 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 A6NIZ1 184 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 EVPLLA8MZ36 301 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 F5H5P2 479 aa3.41□□□□□ -1.86
VPS52-222ENST00000495981 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms