RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 SEC11BP0C7V7 166 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 EDN3P14138 238 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 ZNF44P15621 663 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 TCN2P20062 427 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 OMGP23515 440 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 MEOX2P50222 304 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 CLDN15P56746 228 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 MLF1P58340 268 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 CLINT1Q14677 625 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 WIPI1Q5MNZ9 446 aaPredicted RBP11.24□□□□□ -0.61
PTPN7-217ENST00000495688 TMEM182Q6ZP80 229 aaPredicted RBP11.24□□□□□ -0.61
PTPN7-217ENST00000495688 SLC25A26Q70HW3 274 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 MOB3AQ96BX8 217 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 GINS3Q9BRX5 216 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 SUCNR1Q9BXA5 334 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 OR2H1Q9GZK4 316 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 ZNF286AQ9HBT8 521 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 C19orf12Q9NSK7 152 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 POMT1Q9Y6A1 747 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 ZDBF2Q9HCK1 2354 aa11.24□□□□□ -0.61
PTPN7-217ENST00000495688 CCDC163A0A0D9SF12 145 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 A0A1W2PPH5 198 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 PQLC2LA1A4F0 135 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 NKX2-6A6NCS4 301 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 PATE3B3GLJ2 98 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 PDCD6O75340 191 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 TRAPPC6AO75865 159 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 ARG1P05089 322 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 CFIP05156 583 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 ACAA1P09110 424 aaPredicted RBP11.23□□□□□ -0.61
PTPN7-217ENST00000495688 IL11RAQ14626 422 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 KRBOX4Q5JUW0 171 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 C9orf135Q5VTT2 229 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 RBMS3Q6XE24 437 aaKnown RBP11.23□□□□□ -0.61
PTPN7-217ENST00000495688 LGI3Q8N145 548 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 ZNF611Q8N823 705 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 LRTM2Q8N967 370 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 NTNG2Q96CW9 530 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 ZNF845Q96IR2 970 aaPredicted RBP11.23□□□□□ -0.61
PTPN7-217ENST00000495688 ABHD14AQ9BUJ0 271 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 RGCCQ9H4X1 137 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 RNF122Q9H9V4 155 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 CRIM1Q9NZV1 1036 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 LUZP4Q9P127 313 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 BORCS7-ASMTA0A0B4J1R7 106 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 FAM24AA6NFZ4 105 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 LINC01387J3KSC0 135 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 HSPB6O14558 160 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 NXPH3O95157 252 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 PPYP01298 95 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 CCL2P13500 99 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 RBM11P57052 281 aaKnown RBP11.23□□□□□ -0.61
PTPN7-217ENST00000495688 MALLQ13021 153 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 CPEB3Q8NE35 698 aaKnown RBP11.23□□□□□ -0.61
PTPN7-217ENST00000495688 CCDC54Q8NEL0 328 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 OR2Y1Q8NGV0 311 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 OR10D3Q8NH80 312 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 M1APQ8TC57 530 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 CLDN23Q96B33 292 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 SF3B5Q9BWJ5 86 aaKnown RBP11.23□□□□□ -0.61
PTPN7-217ENST00000495688 MAGT1Q9H0U3 335 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 IL36RNQ9UBH0 155 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 DSPP15924 2871 aaKnown RBP11.23□□□□□ -0.61
PTPN7-217ENST00000495688 DNAJC13O75165 2243 aa11.23□□□□□ -0.61
PTPN7-217ENST00000495688 hCG_1809904A0A1W2PP81 198 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 A0A1W2PR64 198 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 A0A1W2PRV1 198 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 C9J4A7 227 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 GPR37O15354 613 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 GLAP06280 429 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 OR13C7P0DN81 318 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 PTAFRP25105 342 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 FUT6P51993 359 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 HERV-K104P61576 105 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 POLR2GP62487 172 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTPN7-217ENST00000495688 C15orf54Q8N8G6 183 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 FAM213BQ8TBF2 198 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 CPT1CQ8TCG5 803 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 RARRES2Q99969 163 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 SYT3Q9BQG1 590 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 DOCK10Q96BY6 2186 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 C3orf85A0A1B0GTC6 90 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 UMAD1C9J7I0 102 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 CCNOP22674 350 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 GNRHRP30968 328 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 RAB5BP61020 215 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 CTAG1AP78358 180 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 EWSR1Q01844 656 aaKnown RBP eCLIP11.22□□□□□ -0.61
PTPN7-217ENST00000495688 Q0VFX4 171 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 GPR157Q5UAW9 335 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 OR4D5Q8NGN0 318 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 CD300LFQ8TDQ1 290 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 NAT6Q93015 286 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 EGLN1Q9GZT9 426 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 SLC7A10Q9NS82 523 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 SLC7A11Q9UPY5 501 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 CDRT15L2A8MXV6 281 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 GLP1RP43220 463 aa11.22□□□□□ -0.61
PTPN7-217ENST00000495688 UCP2P55851 309 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms