RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	IGSF11	Q5DX21	431 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SPEM1	Q8N4L4	309 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	OR2C3	Q8N628	320 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	LILRB1	Q8NHL6	650 aa	Predicted RBP	11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	TP53RK	Q96S44	253 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ANGPTL4	Q9BY76	406 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	DECR2	Q9NUI1	292 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	C3orf85	A0A1B0GTC6	90 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071		A0A1W2PPE3	182 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	CDRT15L2	A8MXV6	281 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	CXCL13	O43927	109 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	CXCL12	P48061	93 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	RGS19	P49795	217 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ZNF266	Q14584	549 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	CEACAM16	Q2WEN9	425 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	RNF212	Q495C1	297 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	MOB3A	Q96BX8	217 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	MSI2	Q96DH6	328 aa	Known RBP	11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	PAPOLG	Q9BWT3	736 aa	Known RBP	11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	PARPBP	Q9NWS1	579 aa		11.64	□□□□□ -0.55
SUPT20H-222	ENST00000495071	HSPA12A	O43301	675 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SYNGR3	O43761	229 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	CBR3	O75828	277 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	PPY	P01298	95 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SMIM6	P0DI80	62 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	FUT3	P21217	361 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	CRYGS	P22914	178 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	FUT6	P51993	359 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ZNF92	Q03936	586 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	TSC22D1	Q15714	1073 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	EXT1	Q16394	746 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SLC25A24	Q6NUK1	477 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	MRPL14	Q6P1L8	145 aa	Known RBP	11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	LFNG	Q8NES3	379 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	LYPD6B	Q8NI32	183 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	C18orf12	Q96KH6	178 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	GPHA2	Q96T91	129 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	TMEM38B	Q9NVV0	291 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	CACNA1E	Q15878	2313 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	EML6	Q6ZMW3	1958 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	C5orf52	A6NGY3	159 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	DKK1	O94907	266 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	FABP1	P07148	127 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	FOXL2NB	Q6ZUU3	175 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	DPPA2	Q7Z7J5	298 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	TCTEX1D2	Q8WW35	142 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	FOXB1	Q99853	325 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	RARRES2	Q99969	163 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	MPPED1	O15442	326 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	CST7	O76096	145 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	OR2C1	O95371	312 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	TK1	P04183	234 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	RPS10	P46783	165 aa	Known RBP	11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	HAGH	Q16775	308 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ZNF611	Q8N823	705 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SPIN2A	Q99865	258 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SPIN2B	Q9BPZ2	258 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	FAM86C1	Q9NVL1	165 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	RFNG	Q9Y644	331 aa		11.63	□□□□□ -0.55
SUPT20H-222	ENST00000495071	IGHV1-45	A0A0A0MS14	117 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071		P04436	131 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	CST2	P09228	141 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	PSG4	Q00888	419 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	RHEB	Q15382	184 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	LYSMD4	Q5XG99	296 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SLC39A7	Q92504	469 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ARV1	Q9H2C2	271 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ZDHHC8	Q9ULC8	765 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	CFI	P05156	583 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SUCLG1	P53597	346 aa	Known RBP	11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	RAC3	P60763	192 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SRPX	P78539	464 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	C9orf135	Q5VTT2	229 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	RNASE11	Q8TAA1	199 aa	Known RBP	11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	TCEAL7	Q9BRU2	100 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ZNF816-ZNF321P	A0A0X1KG74	233 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ZNHIT1	O43257	154 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	IFNA17	P01571	189 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	PAX6	P26367	422 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ATP6V0C	P27449	155 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	P4HA3	Q7Z4N8	544 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	LRTM2	Q8N967	370 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	EXTL1	Q92935	676 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SLC7A10	Q9NS82	523 aa		11.62	□□□□□ -0.55
SUPT20H-222	ENST00000495071	RBM11	P57052	281 aa	Known RBP	11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	FAM180A	Q6UWF9	173 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SNIP1	Q8TAD8	396 aa	Known RBP	11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	BOD1	Q96IK1	185 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ZNF251	Q9BRH9	671 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	EGLN1	Q9GZT9	426 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	SLC25A31	Q9H0C2	315 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	PI4KA	P42356	2102 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	OR6C6	A6NF89	314 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	HSD17B6	O14756	317 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ADAM20	O43506	726 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	NPBWR2	P48146	333 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	PCBD1	P61457	104 aa		11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.61	□□□□□ -0.55
SUPT20H-222	ENST00000495071	TBC1D26	Q86UD7	250 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms