RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ABHD12Q8N2K0 398 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 OR8J1Q8NGP2 316 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 RNF166Q96A37 237 aaPredicted RBP17.67■□□□□ 0.42
HDDC3-203ENST00000494993 EME1Q96AY2 570 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 LIN7BQ9HAP6 207 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 DPM3Q9P2X0 92 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 PRKACBP22694 351 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 BDH1Q02338 343 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 PRAMEF5Q5TYX0 476 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 TMEM244Q5VVB8 128 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 LHFPL2Q6ZUX7 228 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 RTN4RL2Q86UN3 420 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 OR2G2Q8NGZ5 317 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 ZNF596Q8TC21 504 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 BCAS4Q8TDM0 211 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 AKR1E2Q96JD6 320 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 GABARAPL3Q9BY60 117 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 GAL3ST2Q9H3Q3 398 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 HMG20AQ9NP66 347 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 EXOSC4Q9NPD3 245 aaKnown RBP17.66■□□□□ 0.42
HDDC3-203ENST00000494993 AP4S1Q9Y587 144 aa17.66■□□□□ 0.42
HDDC3-203ENST00000494993 TRGV10A0A0A0MS01 117 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 OR2H2O95918 312 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 PF4V1P10720 104 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 IGLL1P15814 213 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 ZNF20P17024 532 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 CDK2P24941 298 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 CD24P25063 80 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 BRS3P32247 399 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 PDZK1IP1Q13113 114 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 HEPN1Q6WQI6 88 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 CENPVQ7Z7K6 275 aaPredicted RBP17.65■□□□□ 0.42
HDDC3-203ENST00000494993 CAPSLQ8WWF8 208 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 RFKQ969G6 155 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 SPSB1Q96BD6 273 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 FGGYQ96C11 551 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 OPALINQ96PE5 141 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 RIBC2Q9H4K1 309 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 GSTK1Q9Y2Q3 226 aa17.65■□□□□ 0.42
HDDC3-203ENST00000494993 IGKV1-12A0A0C4DH73 117 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 FUOMA2VDF0 154 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 SH2D1BO14796 132 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 IGKV1D-12P01611 117 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 IGLV1-47P01700 117 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 TCTEX1D4Q5JR98 221 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 CORO2AQ92828 525 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 STMN2Q93045 179 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 RFT1Q96AA3 541 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 MBOAT4Q96T53 435 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 SLC25A33Q9BSK2 321 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 TAS2R3Q9NYW6 316 aa17.64■□□□□ 0.41
HDDC3-203ENST00000494993 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-203ENST00000494993 TSSC4Q9Y5U2 329 aaPredicted RBP17.64■□□□□ 0.41
HDDC3-203ENST00000494993 FAM172BPA6NC97 362 aa17.63■□□□□ 0.41
HDDC3-203ENST00000494993 LEUTXA8MZ59 168 aa17.63■□□□□ 0.41
HDDC3-203ENST00000494993 ISG15P05161 165 aa17.63■□□□□ 0.41
HDDC3-203ENST00000494993 FCGR1AP12314 374 aa17.63■□□□□ 0.41
HDDC3-203ENST00000494993 LMO1P25800 156 aa17.63■□□□□ 0.41
HDDC3-203ENST00000494993 CD34P28906 385 aa17.63■□□□□ 0.41
HDDC3-203ENST00000494993 ARHGDIBP52566 201 aa17.63■□□□□ 0.41
HDDC3-203ENST00000494993 CCDC121Q6ZUS5 278 aa17.63■□□□□ 0.41
HDDC3-203ENST00000494993 COMMD4Q9H0A8 199 aa17.63■□□□□ 0.41
HDDC3-203ENST00000494993 FRRS1LQ9P0K9 344 aa17.63■□□□□ 0.41
HDDC3-203ENST00000494993 TCRBV4S1A1TA0A5B7 111 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 KDM4BO94953 1096 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 OR2F2O95006 317 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 PF4P02776 101 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 LPLP06858 475 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 GDNFP39905 211 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 GLIPR1P48060 266 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 NANOS3P60323 173 aaKnown RBP17.62■□□□□ 0.41
HDDC3-203ENST00000494993 AESQ08117 197 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 ABCA11PQ4W5N1 156 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 FDX2Q6P4F2 183 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 MYDGFQ969H8 173 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 RBM14Q96PK6 669 aaKnown RBP17.62■□□□□ 0.41
HDDC3-203ENST00000494993 ZNF286AQ9HBT8 521 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 OAZ3Q9UMX2 235 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 PCDHGB5Q9Y5G0 923 aa17.62■□□□□ 0.41
HDDC3-203ENST00000494993 CSN2P05814 226 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 OCM2P0CE71 109 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 OCMP0CE72 109 aaPredicted RBP17.61■□□□□ 0.41
HDDC3-203ENST00000494993 ZNF44P15621 663 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 CEACAM3P40198 252 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 KPNB1Q14974 876 aaKnown RBP17.61■□□□□ 0.41
HDDC3-203ENST00000494993 HLA-DRB5Q30154 266 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 RNF144BQ7Z419 303 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 KCTD20Q7Z5Y7 419 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 OR4X2Q8NGF9 303 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 OR10AC1Q8NH08 325 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 CREB3L1Q96BA8 519 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 SPACA5Q96QH8 159 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 HHLA2Q9UM44 414 aa17.61■□□□□ 0.41
HDDC3-203ENST00000494993 ODAMA1E959 279 aa17.6■□□□□ 0.41
HDDC3-203ENST00000494993 BUB1B-PAK6H3BSN5 160 aa17.6■□□□□ 0.41
HDDC3-203ENST00000494993 MPIG6BO95866 241 aa17.6■□□□□ 0.41
HDDC3-203ENST00000494993 MT-ND2P03891 347 aa17.6■□□□□ 0.41
HDDC3-203ENST00000494993 HTR1AP08908 422 aa17.6■□□□□ 0.41
HDDC3-203ENST00000494993 PTGFRP43088 359 aa17.6■□□□□ 0.41
HDDC3-203ENST00000494993 SLC35A2P78381 396 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms