RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 ZFP62Q8NB50 900 aaPredicted RBP3.01□□□□□ -1.93
SRRM1-218ENST00000494934 ZNF738Q8NE65 137 aa3.01□□□□□ -1.93
SRRM1-218ENST00000494934 PHF10Q8WUB8 498 aaKnown RBP3.01□□□□□ -1.93
SRRM1-218ENST00000494934 CCDC127Q96BQ5 260 aa3.01□□□□□ -1.93
SRRM1-218ENST00000494934 TRNT1Q96Q11 434 aaKnown RBP3.01□□□□□ -1.93
SRRM1-218ENST00000494934 LINC01587Q99440 93 aa3.01□□□□□ -1.93
SRRM1-218ENST00000494934 LHX5Q9H2C1 402 aa3.01□□□□□ -1.93
SRRM1-218ENST00000494934 PRR14LQ5THK1 2151 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 IGHV3OR16-8A0A075B7F1 116 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 MYBPHLA2RUH7 354 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 UPK2O00526 184 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 FABP7O15540 132 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 CXorf1O96002 111 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 OR5AC1P0C628 307 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 CECR9P0C854 216 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 RPA3P35244 121 aaPredicted RBP3□□□□□ -1.93
SRRM1-218ENST00000494934 TGM4P49221 684 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 PLTPP55058 493 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 CCL23P55773 120 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 FAM53BQ14153 422 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 KHDRBS2Q5VWX1 349 aaKnown RBP3□□□□□ -1.93
SRRM1-218ENST00000494934 C16orf47Q6ZP98 133 aaPredicted RBP3□□□□□ -1.93
SRRM1-218ENST00000494934 FA2HQ7L5A8 372 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 NEGR1Q7Z3B1 354 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 DAZ4Q86SG3 579 aaKnown RBP3□□□□□ -1.93
SRRM1-218ENST00000494934 GATD1Q8NB37 220 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 OR5H2Q8NGV7 314 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 KLF14Q8TD94 323 aaPredicted RBP3□□□□□ -1.93
SRRM1-218ENST00000494934 ITLN2Q8WWU7 325 aaPredicted RBP3□□□□□ -1.93
SRRM1-218ENST00000494934 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3□□□□□ -1.93
SRRM1-218ENST00000494934 ITFG2Q969R8 447 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 PGLYRP3Q96LB9 341 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 ZNF2Q9BSG1 426 aaPredicted RBP3□□□□□ -1.93
SRRM1-218ENST00000494934 SRRQ9GZT4 340 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 SLC25A31Q9H0C2 315 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 FBXL15Q9H469 300 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 FAM60AQ9NP50 221 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 DAZ1Q9NQZ3 744 aaKnown RBP3□□□□□ -1.93
SRRM1-218ENST00000494934 STX18Q9P2W9 335 aaKnown RBP3□□□□□ -1.93
SRRM1-218ENST00000494934 PRO0461Q9UI25 63 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 SLC22A14Q9Y267 594 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 SHANK1Q9Y566 2161 aa3□□□□□ -1.93
SRRM1-218ENST00000494934 IZUMO1RA6ND01 250 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 PRAMEF26H0Y7S4 382 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 J3QLI3 93 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 CALUO43852 315 aaPredicted RBP2.99□□□□□ -1.93
SRRM1-218ENST00000494934 MPZL2O60487 215 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 IGHV1-46P01743 117 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 SNRPAP09012 282 aaKnown RBP2.99□□□□□ -1.93
SRRM1-218ENST00000494934 SLC6A1P30531 599 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 MPIP34949 423 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 HTR2BP41595 481 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 KRTAP10-8P60410 259 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 HBG1P69891 147 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 HBG2P69892 147 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 ATP6AP1LQ52LC2 224 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 KRTAP13-2Q52LG2 175 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 DNLZQ5SXM8 178 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 GLYATQ6IB77 296 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 CLEC18BQ6UXF7 455 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 MARCH3Q86UD3 253 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 SLC26A10Q8NG04 563 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 SUN5Q8TC36 379 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 FAM45AQ8TCE6 357 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 LLPHQ9BRT6 129 aaKnown RBP2.99□□□□□ -1.93
SRRM1-218ENST00000494934 TAPBPLQ9BX59 468 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 SUCNR1Q9BXA5 334 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 RSPO3Q9BXY4 272 aaPredicted RBP2.99□□□□□ -1.93
SRRM1-218ENST00000494934 API5Q9BZZ5 524 aaKnown RBP2.99□□□□□ -1.93
SRRM1-218ENST00000494934 NDEL1Q9GZM8 345 aa2.99□□□□□ -1.93
SRRM1-218ENST00000494934 NOSIPQ9Y314 301 aaKnown RBP2.99□□□□□ -1.93
SRRM1-218ENST00000494934 SEC16AO15027 2179 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 NRCAMQ92823 1304 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 TOR1AO14656 332 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 UBDO15205 165 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 RTL8CO15255 209 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 PDCD6O75340 191 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 CA2P00918 260 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 LIMS3P0CW19 117 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 LIMS4P0CW20 117 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 MAP3K7CLP57077 242 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 SKP1P63208 163 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 BNIP2Q12982 314 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 UBE2NLQ5JXB2 153 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 ZNF773Q6PK81 442 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 USP50Q70EL3 339 aaPredicted RBP2.98□□□□□ -1.93
SRRM1-218ENST00000494934 TRMT10CQ7L0Y3 403 aaKnown RBP2.98□□□□□ -1.93
SRRM1-218ENST00000494934 SPATA24Q86W54 205 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 H1FOOQ8IZA3 346 aaPredicted RBP2.98□□□□□ -1.93
SRRM1-218ENST00000494934 OR7G1Q8NGA0 311 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 OR6K3Q8NGY3 331 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 CCDC12Q8WUD4 166 aaPredicted RBP2.98□□□□□ -1.93
SRRM1-218ENST00000494934 MRAP2Q96G30 205 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 PPP1R36Q96LQ0 422 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 PITX2Q99697 317 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 UPF3BQ9BZI7 483 aaKnown RBP2.98□□□□□ -1.93
SRRM1-218ENST00000494934 METTL8Q9H825 291 aaKnown RBP2.98□□□□□ -1.93
SRRM1-218ENST00000494934 DIABLOQ9NR28 239 aa2.98□□□□□ -1.93
SRRM1-218ENST00000494934 USP42Q9H9J4 1324 aaKnown RBP2.97□□□□□ -1.93
SRRM1-218ENST00000494934 TRAV8-3A0A0A6YYJ7 113 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms