RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 OR51F2Q8NH61 342 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 GSKIPQ9P0R6 139 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 DNAJB11Q9UBS4 358 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 LIPGQ9Y5X9 500 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 A0A096LPE4 126 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 hCG_38984A0A1B0GV85 526 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 A0A1W2PPZ6 126 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 FTH1P19P0C7X4 201 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 CD82P27701 267 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 ACTBL2Q562R1 376 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 TMEM42Q69YG0 159 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 CBLN2Q8IUK8 224 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 TMEM230Q96A57 120 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 CPNE2Q96FN4 548 aaPredicted RBP11.92□□□□□ -0.5
VCP-207ENST00000493886 PECRQ9BY49 303 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 RNF122Q9H9V4 155 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 ACKR4Q9NPB9 350 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 OR5AC2Q9NZP5 309 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 OTOGLQ3ZCN5 2332 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 IGKV1-27A0A075B6S5 117 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 SPAARA0A1B0GVQ0 90 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 NRASP01111 189 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 ADCYAP1P18509 176 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 AMY2BP19961 511 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 FOXG1P55316 489 aaPredicted RBP11.92□□□□□ -0.5
VCP-207ENST00000493886 S100A10P60903 97 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 ARG2P78540 354 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 VAX1Q5SQQ9 334 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 ZNF100Q8IYN0 542 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 NAXEQ8NCW5 288 aa11.92□□□□□ -0.5
VCP-207ENST00000493886 CDRT15L2A8MXV6 281 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 KNG1P01042 644 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 HOXB5P09067 269 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 CLEC18BQ6UXF7 455 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 HOGA1Q86XE5 327 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 PUSL1Q8N0Z8 303 aaKnown RBP11.91□□□□□ -0.5
VCP-207ENST00000493886 TERB2Q8NHR7 220 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 APH1AQ96BI3 265 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 PIK3IP1Q96FE7 263 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 BORCS8Q96FH0 119 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
VCP-207ENST00000493886 C1QTNF5Q9BXJ0 243 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 PRDM14Q9GZV8 571 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 METTL9Q9H1A3 318 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 SERPINE3A8MV23 424 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 XRCC2O43543 280 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 SPRY1O43609 319 aaPredicted RBP11.91□□□□□ -0.5
VCP-207ENST00000493886 ANGPTL7O43827 346 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 CIDEAO60543 219 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 ZNF205O95201 554 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 RBP2P50120 134 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 SRSF4Q08170 494 aaKnown RBP11.91□□□□□ -0.5
VCP-207ENST00000493886 RNPS1Q15287 305 aaKnown RBP11.91□□□□□ -0.5
VCP-207ENST00000493886 USF2Q15853 346 aaPredicted RBP11.91□□□□□ -0.5
VCP-207ENST00000493886 ANKRD55Q3KP44 614 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 ZNF766Q5HY98 468 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 NKAPLQ5M9Q1 402 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 LHFPL2Q6ZUX7 228 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 Q96M66 194 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 DEFB127Q9H1M4 99 aa11.91□□□□□ -0.5
VCP-207ENST00000493886 METTL8Q9H825 291 aaKnown RBP11.91□□□□□ -0.5
VCP-207ENST00000493886 GLRA1P23415 457 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 GABRR1P24046 479 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 RRADP55042 308 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 RAB4BP61018 213 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 ARL6IP1Q15041 203 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 OR8B8Q15620 311 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 VASH2Q86V25 355 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 MCEMP1Q8IX19 187 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 OR5H2Q8NGV7 314 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 RNF126Q9BV68 326 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 ZNF701Q9NV72 531 aaPredicted RBP11.9□□□□□ -0.5
VCP-207ENST00000493886 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 FAM96BQ9Y3D0 163 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 PRRC2CQ9Y520 2896 aaKnown RBP11.9□□□□□ -0.5
VCP-207ENST00000493886 J3QW42 95 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 HLA-HP01893 362 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 TAGLN2P37802 199 aaKnown RBP11.9□□□□□ -0.5
VCP-207ENST00000493886 SOX8P57073 446 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 RSU1Q15404 277 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 FAHD2BQ6P2I3 314 aaPredicted RBP11.9□□□□□ -0.5
VCP-207ENST00000493886 ZNF585AQ6P3V2 769 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 SPSB4Q96A44 273 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 FAHD2AQ96GK7 314 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 OR10C1Q96KK4 312 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 PIGMQ9H3S5 423 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 ZNF552Q9H707 407 aaPredicted RBP11.9□□□□□ -0.5
VCP-207ENST00000493886 EHFQ9NZC4 300 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 SHANK1Q9Y566 2161 aa11.9□□□□□ -0.5
VCP-207ENST00000493886 CXorf65A6NEN9 183 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 CSTBP04080 98 aaKnown RBP11.9□□□□□ -0.51
VCP-207ENST00000493886 SFTPBP07988 381 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 OR3A2P47893 321 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.51
VCP-207ENST00000493886 TMEM128Q5BJH2 165 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 RNFT1Q5M7Z0 435 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 UNQ6494/PRO21346Q6UXR6 183 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 COLCA1Q6ZS62 124 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 NUFIP2Q7Z417 695 aaKnown RBP11.9□□□□□ -0.51
VCP-207ENST00000493886 C6orf201Q7Z4U5 140 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms