RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 MEF2CQ06413 473 aaPredicted RBP5.72□□□□□ -1.49
TOP3A-207ENST00000493648 SCN1BQ07699 218 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 ACSM1Q08AH1 577 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 FOXL1Q12952 345 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 RIPK1Q13546 671 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 RSU1Q15404 277 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 GRK1Q15835 563 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 Q499Y3 187 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 ZNF529Q6P280 563 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 C16orf87Q6PH81 154 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 RNF144BQ7Z419 303 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 TMEM86BQ8N661 226 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 ZFP41Q8N8Y5 198 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 CHST4Q8NCG5 386 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 PXT1Q8NFP0 134 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 OR52N4Q8NGI2 321 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 TNFAIP8L1Q8WVP5 186 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 SSMEM1Q8WWF3 244 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 RGP1Q92546 391 aaPredicted RBP5.72□□□□□ -1.49
TOP3A-207ENST00000493648 TNFRSF14Q92956 283 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 DUX5Q96PT3 197 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 MND1Q9BWT6 205 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 CDCA4Q9BXL8 241 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 ANKRD60Q9BZ19 345 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 METTL9Q9H1A3 318 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 DPAGT1Q9H3H5 408 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 PCDHB16Q9NRJ7 776 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 PAK1IP1Q9NWT1 392 aaPredicted RBP5.72□□□□□ -1.49
TOP3A-207ENST00000493648 ING4Q9UNL4 249 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 RRP15Q9Y3B9 282 aaKnown RBP5.72□□□□□ -1.49
TOP3A-207ENST00000493648 POMT1Q9Y6A1 747 aa5.72□□□□□ -1.49
TOP3A-207ENST00000493648 CUBNO60494 3623 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 A0A0G2JK05 382 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 PNMA8CA0A1B0GUJ8 204 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 A0A1W2PPK0 400 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 A0A1W2PRD5 423 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 A0A1W2PRF3 423 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 A0A1W2PRM7 423 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 TMEM82A0PJX8 343 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 MEIOCA2RUB1 952 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 SIRPB1O00241 398 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 GABRPO00591 440 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 HTR3BO95264 441 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 ATP6V1G2O95670 118 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 OR2H2O95918 312 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 PAHP00439 452 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 CSTBP04080 98 aaKnown RBP5.71□□□□□ -1.5
TOP3A-207ENST00000493648 MELTFP08582 738 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 ZNF728P0DKX0 622 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 HKR1P10072 659 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 ZNF44P15621 663 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 CCL3L1P16619 93 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 MAPK3P27361 379 aaPredicted RBP5.71□□□□□ -1.5
TOP3A-207ENST00000493648 ERP29P30040 261 aaKnown RBP5.71□□□□□ -1.5
TOP3A-207ENST00000493648 IER3P46695 156 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 COMPP49747 757 aaPredicted RBP5.71□□□□□ -1.5
TOP3A-207ENST00000493648 LGALS4P56470 323 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 PRB3Q04118 309 aaPredicted RBP5.71□□□□□ -1.5
TOP3A-207ENST00000493648 GPR176Q14439 515 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 EDDM3AQ14507 147 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 ZNF273Q14593 569 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 SPHARQ15513 63 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 MED22Q15528 200 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 MIDNQ504T8 468 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 DDI2Q5TDH0 399 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 ELP2Q6IA86 826 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 CRIP3Q6Q6R5 217 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 IZUMO2Q6UXV1 221 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 ASCL4Q6XD76 172 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 C17orf107Q6ZR85 190 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 MS4A15Q8N5U1 240 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 C3orf56Q8N813 242 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 OR4S1Q8NGB4 309 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 OR51A2Q8NGJ7 313 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 OR13C5Q8NGS8 318 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 OR13D1Q8NGV5 346 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 PGLYRP3Q96LB9 341 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 C1orf147Q96MC9 270 aaPredicted RBP5.71□□□□□ -1.5
TOP3A-207ENST00000493648 ZNF714Q96N38 554 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 OR14A2Q96R54 314 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 NR1H4Q96RI1 486 aaPredicted RBP5.71□□□□□ -1.5
TOP3A-207ENST00000493648 CCDC90BQ9GZT6 254 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 FAM192AQ9GZU8 254 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 CHST6Q9GZX3 395 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 TNFRSF19Q9NS68 423 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 IL36RNQ9UBH0 155 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 RAB26Q9ULW5 256 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 FOXJ3Q9UPW0 622 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 SVEP1Q4LDE5 3571 aa5.71□□□□□ -1.5
TOP3A-207ENST00000493648 TRGV10A0A0A0MS01 117 aa5.7□□□□□ -1.5
TOP3A-207ENST00000493648 TRBV5-7A0A0A0MS05 114 aa5.7□□□□□ -1.5
TOP3A-207ENST00000493648 MEGF11A6BM72 1044 aa5.7□□□□□ -1.5
TOP3A-207ENST00000493648 BTBD17A6NE02 478 aa5.7□□□□□ -1.5
TOP3A-207ENST00000493648 RGS10O43665 173 aa5.7□□□□□ -1.5
TOP3A-207ENST00000493648 PSPNO60542 156 aa5.7□□□□□ -1.5
TOP3A-207ENST00000493648 ZNF780AO75290 641 aaPredicted RBP5.7□□□□□ -1.5
TOP3A-207ENST00000493648 RBP4P02753 201 aa5.7□□□□□ -1.5
TOP3A-207ENST00000493648 IGFBP3P17936 291 aaPredicted RBP5.7□□□□□ -1.5
TOP3A-207ENST00000493648 SAA4P35542 130 aa5.7□□□□□ -1.5
TOP3A-207ENST00000493648 VHLP40337 213 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms