RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 TMEM91Q6ZNR0 172 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 C1orf122Q6ZSJ8 110 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 IL17RELQ6ZVW7 336 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 COMMD2Q86X83 199 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 ANGPTL5Q86XS5 388 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 MKXQ8IYA7 352 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 Q8IYB0 196 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 OR2C3Q8N628 320 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 OR13C3Q8NGS6 347 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 TMEM186Q96B77 213 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 BORCS8Q96FH0 119 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 NEIL1Q96FI4 390 aaPredicted RBP5.57□□□□□ -1.52
VPS52-219ENST00000493379 MED30Q96HR3 178 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 OPALINQ96PE5 141 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 DERL3Q96Q80 235 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 MGLLQ99685 303 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 GAL3ST1Q99999 423 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 BEX2Q9BXY8 128 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 WDR13Q9H1Z4 485 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 PLEKHA1Q9HB21 404 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 NEK6Q9HC98 313 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 NLKQ9UBE8 527 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 CTSZQ9UBR2 303 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 DHDHQ9UQ10 334 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 MAB21L2Q9Y586 359 aa5.57□□□□□ -1.52
VPS52-219ENST00000493379 OR2AT4A6NND4 320 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 F8VVB4 439 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 F8VWA3 439 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 VENTXO95231 258 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 VSIG10L2P0DP72 767 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 MED14OSP0DP75 135 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 ZNF20P17024 532 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 PI3P19957 117 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 RAB3AP20336 220 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 GLRA1P23415 457 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 MAPK3P27361 379 aaPredicted RBP5.56□□□□□ -1.52
VPS52-219ENST00000493379 BMXP51813 675 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 MTCP1P56278 107 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 SEC61A1P61619 476 aaKnown RBP5.56□□□□□ -1.52
VPS52-219ENST00000493379 HOXA4Q00056 320 aaPredicted RBP5.56□□□□□ -1.52
VPS52-219ENST00000493379 PAX5Q02548 391 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 GAGE13Q4V321 117 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 ACSM3Q53FZ2 586 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 DMRTC1Q5HYR2 192 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 NHLRC3Q5JS37 347 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 SYT6Q5T7P8 510 aaPredicted RBP5.56□□□□□ -1.52
VPS52-219ENST00000493379 SFRP4Q6FHJ7 346 aaPredicted RBP5.56□□□□□ -1.52
VPS52-219ENST00000493379 ZNF773Q6PK81 442 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 ZNF367Q7RTV3 350 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 SLC36A1Q7Z2H8 476 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 RNF144BQ7Z419 303 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 C3orf56Q8N813 242 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 OR8B3Q8NGG8 313 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 OR51T1Q8NGJ9 327 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 OR51F2Q8NH61 342 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 RAB40AQ8WXH6 277 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 FCGR1BQ92637 280 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 TMIGD2Q96BF3 282 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 SEH1LQ96EE3 360 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 CEP19Q96LK0 163 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 OR8B2Q96RD0 313 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 SSBP3Q9BWW4 388 aaPredicted RBP5.56□□□□□ -1.52
VPS52-219ENST00000493379 FAM234AQ9H0X4 552 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 PPIL3Q9H2H8 161 aaKnown RBP5.56□□□□□ -1.52
VPS52-219ENST00000493379 NCOR1P1Q9H4R4 102 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 HMG20AQ9NP66 347 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 HIF1ANQ9NWT6 349 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 IL36GQ9NZH8 169 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 LPAR3Q9UBY5 353 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 OPN4Q9UHM6 478 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 INSIG2Q9Y5U4 225 aa5.56□□□□□ -1.52
VPS52-219ENST00000493379 DYNC2H1Q8NCM8 4307 aaKnown RBP5.55□□□□□ -1.52
VPS52-219ENST00000493379 TRAV8-7A0A075B6U6 113 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 TRDV1A0A1B0GX56 115 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 FAM230AA0A1W2PPH8 454 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 hCG_1807616A0A1W2PRN6 198 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 RFPL4AA6NLU0 287 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 RFPL4AL1F8VTS6 287 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 K7N7A8 449 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 F2RL2O00254 374 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 DVL1O14640 695 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 ZNF737O75373 536 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 GYPAP02724 150 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 CHRM2P08172 466 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 MMP9P14780 707 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 SRMP19623 302 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 BDKRB2P30411 391 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 FGF9P31371 208 aaPredicted RBP5.55□□□□□ -1.52
VPS52-219ENST00000493379 GABRA5P31644 462 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 PRDX2P32119 198 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 CD80P33681 288 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 PTGFRP43088 359 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 MAP2K4P45985 399 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 PITPNBP48739 271 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 MED22Q15528 200 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 SSX1Q16384 188 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 DGUOKQ16854 277 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 SMIM21Q3B7S5 101 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 FBLN7Q53RD9 439 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 ESCO2Q56NI9 601 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms