RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PRKACAP17612 351 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 HLA-GP17693 338 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 GCH1P30793 250 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 CALCRP30988 508 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 H2BFSP57053 126 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 NAAAQ02083 359 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 ALKBH6Q3KRA9 238 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 Q5BKY6 102 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 C11orf88Q6PI97 169 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 DHRS11Q6UWP2 260 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 Q6ZS49 121 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 BATF2Q8N1L9 274 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 SCCPDHQ8NBX0 429 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 GTF3AQ92664 365 aaKnown RBP11.96□□□□□ -0.49
PTPN7-216ENST00000492977 SNRNP40Q96DI7 357 aaKnown RBP11.96□□□□□ -0.49
PTPN7-216ENST00000492977 PHB2Q99623 299 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 DHRS9Q9BPW9 319 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 C5orf66Q9H5L9 145 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 IFT22Q9H7X7 185 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 DECR2Q9NUI1 292 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 OPN4Q9UHM6 478 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 RAXQ9Y2V3 346 aa11.96□□□□□ -0.49
PTPN7-216ENST00000492977 ESPL1Q14674 2120 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 OR5H14A6NHG9 310 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 MCRIP1C9JLW8 97 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 FAM87AP0C7U9 286 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 OR5H8P0DN80 308 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 IKZF1Q13422 519 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 ZNF660Q6AZW8 331 aaPredicted RBP11.96□□□□□ -0.5
PTPN7-216ENST00000492977 LIN54Q6MZP7 749 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 MRGPRGQ86SM5 289 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 WDR86Q86TI4 376 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 SPERTQ8NA61 448 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 DYRK2Q92630 601 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 RTBDNQ9BSG5 229 aaPredicted RBP11.96□□□□□ -0.5
PTPN7-216ENST00000492977 TMPRSS13Q9BYE2 586 aa11.96□□□□□ -0.5
PTPN7-216ENST00000492977 RIMS4Q9H426 269 aaPredicted RBP11.96□□□□□ -0.5
PTPN7-216ENST00000492977 CFAP47Q6ZTR5 3102 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 TIMM8AO60220 97 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-216ENST00000492977 RHBDL1O75783 438 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 SIX6O95475 246 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 VAMP1P23763 118 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 ERVK11-1P61568 191 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 RBPJQ06330 500 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 SRSF4Q08170 494 aaKnown RBP11.95□□□□□ -0.5
PTPN7-216ENST00000492977 ZNF154Q13106 437 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 ZNF2Q9BSG1 426 aaPredicted RBP11.95□□□□□ -0.5
PTPN7-216ENST00000492977 CXXC4Q9H2H0 198 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 ELOVL5Q9NYP7 299 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 ITGB1BP2Q9UKP3 347 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 SPEF1Q9Y4P9 236 aa11.95□□□□□ -0.5
PTPN7-216ENST00000492977 A0A0G2JNJ9 132 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 A0A1B0GWJ7 208 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 FAM221AA4D161 298 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 SFT2D2O95562 160 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 NAPSAO96009 420 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 PGA5P0DJD9 388 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 PPP3CBP16298 524 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 BMP5P22003 454 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 ZNF83P51522 516 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 MZT1Q08AG7 82 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 RBM39Q14498 530 aaKnown RBP11.94□□□□□ -0.5
PTPN7-216ENST00000492977 DCAF12L2Q5VW00 463 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 SLC22A25Q6T423 547 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 NCCRP1Q6ZVX7 275 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-216ENST00000492977 OR5M8Q8NGP6 311 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 TMEM230Q96A57 120 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 ZNF488Q96MN9 340 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 CHMP1AQ9HD42 196 aaPredicted RBP11.94□□□□□ -0.5
PTPN7-216ENST00000492977 ASF1BQ9NVP2 202 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 IL36RNQ9UBH0 155 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 Q9UFV3 132 aa11.94□□□□□ -0.5
PTPN7-216ENST00000492977 C14orf166Q9Y224 244 aaKnown RBP11.94□□□□□ -0.5
PTPN7-216ENST00000492977 HEATR1Q9H583 2144 aaKnown RBP11.93□□□□□ -0.5
PTPN7-216ENST00000492977 A0A0B4J2A0 478 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 EEF1E1-BLOC1S5C9J1V9 151 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 H0YL77 283 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 M0R1B8 84 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 NOS1APO75052 506 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-216ENST00000492977 CRYAAP02489 173 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 PGAM2P15259 253 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 FABP6P51161 128 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 SNRPD2P62316 118 aaKnown RBP11.93□□□□□ -0.5
PTPN7-216ENST00000492977 LGALSLQ3ZCW2 172 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-216ENST00000492977 LY6G6FQ5SQ64 297 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 RGS7BPQ6MZT1 257 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-216ENST00000492977 SUMF2Q8NBJ7 301 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 GRPEL2Q8TAA5 225 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 NRIP2Q9BQI9 281 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 WDR13Q9H1Z4 485 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 CLEC4MQ9H2X3 399 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-216ENST00000492977 Q9N2K0 584 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 SHPKQ9UHJ6 478 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 TINAGQ9UJW2 476 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 PRRC2CQ9Y520 2896 aaKnown RBP11.93□□□□□ -0.5
PTPN7-216ENST00000492977 ANKRD11Q6UB99 2663 aaPredicted RBP11.93□□□□□ -0.5
PTPN7-216ENST00000492977 PRR14LQ5THK1 2151 aa11.93□□□□□ -0.5
PTPN7-216ENST00000492977 TRBV6-6A0A0A6YYG2 114 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 PLSCR5A0PG75 271 aa11.92□□□□□ -0.5
PTPN7-216ENST00000492977 DBX1A6NMT0 343 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms