RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 RERGLQ9H628 205 aa11.06□□□□□ -0.64
HDAC3-213ENST00000492506 C19orf12Q9NSK7 152 aa11.06□□□□□ -0.64
HDAC3-213ENST00000492506 PLEK2Q9NYT0 353 aa11.06□□□□□ -0.64
HDAC3-213ENST00000492506 H2AFY2Q9P0M6 372 aaPredicted RBP11.06□□□□□ -0.64
HDAC3-213ENST00000492506 SMIM30A4D0T7 59 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 COLCA2A8K830 154 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 E9PI62 339 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 TSTD3H0UI37 97 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 TRAPPC2LH3BP13 241 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 IGHV3-13P01766 116 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 CD2P06729 351 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 MELTFP08582 738 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 MDKP21741 143 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-213ENST00000492506 S100A2P29034 98 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 HTR5AP47898 357 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 UCP2P55851 309 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 SELENOVP59797 346 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 MADCAM1Q13477 382 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 SLC9A3R2Q15599 337 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 ATPAF1Q5TC12 328 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-213ENST00000492506 TMEM244Q5VVB8 128 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 GLT8D1Q68CQ7 371 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 RAB12Q6IQ22 244 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 LEG1Q6P5S2 330 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 TMEM88Q6PEY1 159 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 ACOT7LQ6ZUV0 252 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 CBLN2Q8IUK8 224 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 SLC22A24Q8N4F4 322 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 SNX33Q8WV41 574 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 SPRYD4Q8WW59 207 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-213ENST00000492506 ACOT11Q8WXI4 607 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-213ENST00000492506 C11orf40Q8WZ69 217 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 TMEM54Q969K7 222 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 SAT2Q96F10 170 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-213ENST00000492506 TIMD4Q96H15 378 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 GPA33Q99795 319 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 SAP30LQ9HAJ7 183 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 BCL2L10Q9HD36 194 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 CHMP1AQ9HD42 196 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-213ENST00000492506 DECR2Q9NUI1 292 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 COMMD9Q9P000 198 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 POLR3KQ9Y2Y1 108 aaPredicted RBP11.05□□□□□ -0.64
HDAC3-213ENST00000492506 KPTNQ9Y664 436 aa11.05□□□□□ -0.64
HDAC3-213ENST00000492506 NBEAL2Q6ZNJ1 2754 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 SHISA3A0PJX4 238 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 ZNF726A6NNF4 738 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 PLPP3O14495 311 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 GPR37O15354 613 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 FOXH1O75593 365 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 SOX14O95416 240 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 IGHV1-46P01743 117 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 OPN1SWP03999 348 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 OR8G3PP0DMU2 310 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 NOS3P29474 1203 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 GCH1P30793 250 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 CEACAM6P40199 344 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 GLP1RP43220 463 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 OR1E2P47887 323 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 CSNK1A1P48729 337 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 PKIAP61925 76 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 GLO1Q04760 184 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 FABP9Q0Z7S8 132 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 SPRNQ5BIV9 151 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 ALG10BQ5I7T1 473 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 ZNF613Q6PF04 617 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 ACBD7Q8N6N7 88 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 AKR7LQ8NHP1 331 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 C2CD4CQ8TF44 421 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 RNF141Q8WVD5 230 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 CCL17Q92583 94 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 SLC25A28Q96A46 364 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 S100A13Q99584 98 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 TMEM38BQ9NVV0 291 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 ETV7Q9Y603 341 aa11.04□□□□□ -0.64
HDAC3-213ENST00000492506 GGT3PA6NGU5 568 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 J3KTA2 159 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 CSF1P09603 554 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 TPT1P13693 172 aaKnown RBP11.03□□□□□ -0.64
HDAC3-213ENST00000492506 BDKRB2P30411 391 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 BIDP55957 195 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 ACTC1P68032 377 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 ACTA1P68133 377 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 PJVKQ0ZLH3 352 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 TSPAN31Q12999 210 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 ZNF154Q13106 437 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 PNLIPRP3Q17RR3 467 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 AADACL4Q5VUY2 407 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 EIF5AL1Q6IS14 154 aaKnown RBP11.03□□□□□ -0.64
HDAC3-213ENST00000492506 ULK3Q6PHR2 472 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 ZNF546Q86UE3 836 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 KLBQ86Z14 1044 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 TNFAIP8L1Q8WVP5 186 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 MAL2Q969L2 176 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 RAB24Q969Q5 203 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 CDH20Q9HBT6 801 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 TMEM100Q9NV29 134 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 KCNIP3Q9Y2W7 256 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 MMP24Q9Y5R2 645 aa11.03□□□□□ -0.64
HDAC3-213ENST00000492506 SOX21Q9Y651 276 aaPredicted RBP11.03□□□□□ -0.64
HDAC3-213ENST00000492506 TXNL1O43396 289 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms