RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 GUCA2BQ16661 112 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 OR52M1Q8NGK5 317 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 C10orf35Q96D05 121 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 SCGB3A2Q96PL1 93 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 NECAP2Q9NVZ3 263 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 C1orf123Q9NWV4 160 aa10.71□□□□□ -0.69
HMGN1-220ENST00000492280 ANKRD11Q6UB99 2663 aaPredicted RBP10.71□□□□□ -0.7
HMGN1-220ENST00000492280 HEATR1Q9H583 2144 aaKnown RBP10.71□□□□□ -0.7
HMGN1-220ENST00000492280 TRBV6-7A0A0A0MS04 114 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 A0A1B0GV50 99 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 ABCD4O14678 606 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 SYNGR4O95473 234 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 MRPL21Q7Z2W9 205 aaKnown RBP10.71□□□□□ -0.7
HMGN1-220ENST00000492280 ZNF100Q8IYN0 542 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 OR4A4PQ8NGN8 299 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 DDA1Q9BW61 102 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 C1QTNF5Q9BXJ0 243 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 SLC5A7Q9GZV3 580 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 BCO1Q9HAY6 547 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 PLA2G2EQ9NZK7 142 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 B4GALT7Q9UBV7 327 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 FBXL17Q9UF56 701 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 RFNGQ9Y644 331 aa10.71□□□□□ -0.7
HMGN1-220ENST00000492280 PCNX1Q96RV3 2341 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 ZNF732B4DXR9 585 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 PHF1O43189 567 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-220ENST00000492280 TNFSF12O43508 249 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 PDCD6O75340 191 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 CTSDP07339 412 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-220ENST00000492280 HKR1P10072 659 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 IL32P24001 234 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 CYCSP99999 105 aaKnown RBP10.7□□□□□ -0.7
HMGN1-220ENST00000492280 IL15RAQ13261 267 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 ADAMTS17Q8TE56 1095 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 EXTL1Q92935 676 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 APH1AQ96BI3 265 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 MTCH1Q9NZJ7 389 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 USF3Q68DE3 2245 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 CELA3BP08861 270 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 SCTP09683 121 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 MALLQ13021 153 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 HAGHLQ6PII5 290 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-220ENST00000492280 SECTM1Q8WVN6 248 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 TP53RKQ96S44 253 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 C12orf4Q9NQ89 552 aa10.7□□□□□ -0.7
HMGN1-220ENST00000492280 ZNF883P0CG24 379 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 ERVS71-1P61550 626 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 ZNF273Q14593 569 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 OR2T2Q6IF00 324 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 RDH5Q92781 318 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 ZPBPQ9BS86 351 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 LDAHQ9H6V9 325 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 MEX3AA1L020 520 aaKnown RBP10.69□□□□□ -0.7
HMGN1-220ENST00000492280 HS3ST1O14792 307 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 SNAPC5O75971 98 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 MBPP02686 304 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-220ENST00000492280 RPL12P30050 165 aaKnown RBP10.69□□□□□ -0.7
HMGN1-220ENST00000492280 WNT5AP41221 380 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 LPAR6P43657 344 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 TMEM187Q14656 261 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 ZNF169Q14929 603 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-220ENST00000492280 SPIN3Q5JUX0 258 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 MCEMP1Q8IX19 187 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 SLC30A7Q8NEW0 376 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 CNTNAP3BQ96NU0 1288 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 CNTNAP3Q9BZ76 1288 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 NAA60Q9H7X0 242 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 ZNF286AQ9HBT8 521 aa10.69□□□□□ -0.7
HMGN1-220ENST00000492280 K7EPK0 472 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 RHBDL1O75783 438 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 C1QL1O75973 258 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 FAM157CP0CG43 387 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 FHITP49789 147 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 MST1LQ2TV78 715 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 FAM71E2Q8N5Q1 922 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 STOML3Q8TAV4 291 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 GLYATL2Q8WU03 294 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 MARC2Q969Z3 335 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 AQP10Q96PS8 301 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 REPIN1Q9BWE0 567 aaKnown RBP10.68□□□□□ -0.7
HMGN1-220ENST00000492280 SPRR3Q9UBC9 169 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 HSF4Q9ULV5 492 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 CEP295Q9C0D2 2601 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 DOCK11Q5JSL3 2073 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 BSNQ9UPA5 3926 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 KALRNO60229 2985 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 IGKV3D-15A0A087WSY6 115 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 IGKV1D-13A0A0B4J2D9 117 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 RRP8O43159 456 aaKnown RBP10.68□□□□□ -0.7
HMGN1-220ENST00000492280 MED6O75586 246 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 SP1P08047 785 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 IGKV1-13P0DP09 117 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 PRKACAP17612 351 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 FUT3P21217 361 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 TMEM33P57088 247 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 AKIRIN2Q53H80 203 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 TFAP2EQ6VUC0 442 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 C20orf204Q6ZNR8 217 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 PRR18Q8N4B5 295 aa10.68□□□□□ -0.7
HMGN1-220ENST00000492280 TMEM45BQ96B21 275 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms