RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 IGKV1-12A0A0C4DH73 117 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 CLPSL1A2RUU4 121 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 MGST3O14880 152 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 CASQ2O14958 399 aaPredicted RBP12.29□□□□□ -0.44
USP39-217ENST00000491659 ATP6V1G2O95670 118 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 IGKV1D-12P01611 117 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 TMEM225BP0DP42 221 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 BMXP51813 675 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 DLX6P56179 175 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 RELBQ01201 579 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 LRRC75BQ2VPJ9 315 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 XAF1Q6GPH4 301 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 OR52N4Q8NGI2 321 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 RGP1Q92546 391 aaPredicted RBP12.29□□□□□ -0.44
USP39-217ENST00000491659 GPER1Q99527 375 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 LINC00312Q9Y6C7 94 aa12.29□□□□□ -0.44
USP39-217ENST00000491659 MEX3AA1L020 520 aaKnown RBP12.28□□□□□ -0.44
USP39-217ENST00000491659 FUOMA2VDF0 154 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 H3BUX3 64 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 PSPNO60542 156 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 OR2H2O95918 312 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 ZNF44P15621 663 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 OR3A1P47881 315 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 ZP1P60852 638 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 RNF144BQ7Z419 303 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 TRAPPC6BQ86SZ2 158 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 TPRX1Q8N7U7 411 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 OR4S1Q8NGB4 309 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 OR52N1Q8NH53 320 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 RPS4Y2Q8TD47 263 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 C17orf50Q8WW18 174 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 WFDC12Q8WWY7 111 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 TMEM106AQ96A25 262 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 SMIM19Q96E16 107 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 SSX3Q99909 188 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 FAM192AQ9GZU8 254 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 BABAM2Q9NXR7 383 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 TAS2R4Q9NYW5 299 aa12.28□□□□□ -0.44
USP39-217ENST00000491659 EFCAB10A6NFE3 127 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 CLPXO76031 633 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 ARG1P05089 322 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 IGHV1-8P0DP01 117 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 ERP29P30040 261 aaKnown RBP12.27□□□□□ -0.45
USP39-217ENST00000491659 TGFBR2P37173 567 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 MTNR1BP49286 362 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 P2RX3P56373 397 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 PPP3R1P63098 170 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 AANATQ16613 207 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 CRIP3Q6Q6R5 217 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 TCF23Q7RTU1 214 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 SATL1Q86VE3 508 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 CHST4Q8NCG5 386 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 TNFAIP8L1Q8WVP5 186 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 GGHQ92820 318 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 FOXRED1Q96CU9 486 aaPredicted RBP12.27□□□□□ -0.45
USP39-217ENST00000491659 MEGF9Q9H1U4 602 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 CNOT2Q9NZN8 540 aaKnown RBP12.27□□□□□ -0.45
USP39-217ENST00000491659 CLEC2DQ9UHP7 191 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 ZNF281Q9Y2X9 895 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 TBL2Q9Y4P3 447 aaKnown RBP12.27□□□□□ -0.45
USP39-217ENST00000491659 RNF114Q9Y508 228 aa12.27□□□□□ -0.45
USP39-217ENST00000491659 GABRPO00591 440 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 MYL12BO14950 172 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 OGG1O15527 345 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 GNAO1P09471 354 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 SCN1BQ07699 218 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 ST3GAL4Q11206 333 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 ZNF529Q6P280 563 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 BRICD5Q6PL45 260 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 Q6ZSV7 163 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 PXT1Q8NFP0 134 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 OR51A2Q8NGJ7 313 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 PPA2Q9H2U2 334 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 GAL3ST2Q9H3Q3 398 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 ZNF696Q9H7X3 374 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 DCLRE1BQ9H816 532 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 UBE2J1Q9Y385 318 aaPredicted RBP12.26□□□□□ -0.45
USP39-217ENST00000491659 SESN1Q9Y6P5 492 aa12.26□□□□□ -0.45
USP39-217ENST00000491659 TRGV10A0A0A0MS01 117 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 ODF3BA8MYP8 253 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 DEGS1O15121 323 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 LALBAP00709 142 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 LMO1P25800 156 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 TAS2R43P59537 309 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 DYNC1I2Q13409 638 aaKnown RBP12.25□□□□□ -0.45
USP39-217ENST00000491659 RSU1Q15404 277 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 LY6EQ16553 131 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 PRR31Q5SQ13 230 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 DDI2Q5TDH0 399 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 ZNF626Q68DY1 528 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 AHSA2Q719I0 299 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 STX19Q8N4C7 294 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 OR11H6Q8NGC7 330 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 LINC01006Q8NI28 216 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 AJUBAQ96IF1 538 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 RAB18Q9NP72 206 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 CKLFQ9UBR5 152 aa12.25□□□□□ -0.45
USP39-217ENST00000491659 SIRT4Q9Y6E7 314 aaPredicted RBP12.25□□□□□ -0.45
USP39-217ENST00000491659 NBEAL1Q6ZS30 2694 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms