RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 HLA-DRB5Q30154 266 aa10.41□□□□□ -0.74
USF1-206ENST00000491629 DEFB136Q30KP8 78 aa10.41□□□□□ -0.74
USF1-206ENST00000491629 ZNF829Q3KNS6 432 aaPredicted RBP10.41□□□□□ -0.74
USF1-206ENST00000491629 UNQ9370/PRO34162Q6UXP9 181 aa10.41□□□□□ -0.74
USF1-206ENST00000491629 ZBTB49Q6ZSB9 765 aa10.41□□□□□ -0.74
USF1-206ENST00000491629 SLC25A26Q70HW3 274 aa10.41□□□□□ -0.74
USF1-206ENST00000491629 HS3ST5Q8IZT8 346 aa10.41□□□□□ -0.74
USF1-206ENST00000491629 CAPSLQ8WWF8 208 aa10.41□□□□□ -0.74
USF1-206ENST00000491629 RBFOX1Q9NWB1 397 aaKnown RBP10.41□□□□□ -0.74
USF1-206ENST00000491629 OR52A1Q9UKL2 312 aa10.41□□□□□ -0.74
USF1-206ENST00000491629 GTF2A1LQ9UNN4 478 aa10.41□□□□□ -0.74
USF1-206ENST00000491629 UBE2J1Q9Y385 318 aaPredicted RBP10.41□□□□□ -0.74
USF1-206ENST00000491629 DHRS7CA6NNS2 312 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 NUDT19A8MXV4 375 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 LOC110117498-PIK3R3F6TDL0 507 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 H3BUI4 141 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 RAMP3O60896 148 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 E2F6O75461 281 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 CALB2P22676 271 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 GABRR1P24046 479 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 ERP29P30040 261 aaKnown RBP10.4□□□□□ -0.74
USF1-206ENST00000491629 GLIPR1P48060 266 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 P2RX3P56373 397 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 DIAPH2-AS1Q14236 149 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 ZNF146Q15072 292 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 BCL2L15Q5TBC7 163 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 LCNL1Q6ZST4 164 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 BCDIN3DQ7Z5W3 292 aaKnown RBP10.4□□□□□ -0.74
USF1-206ENST00000491629 RTN4RL2Q86UN3 420 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 ZNF695Q8IW36 515 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 C5orf56Q8N8D9 126 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 CORO2AQ92828 525 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 EMG1Q92979 244 aaKnown RBP10.4□□□□□ -0.74
USF1-206ENST00000491629 ZFP57Q9NU63 452 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 MRM2Q9UI43 246 aaKnown RBP10.4□□□□□ -0.74
USF1-206ENST00000491629 IKZF2Q9UKS7 526 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 MOB4Q9Y3A3 225 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 R4GMQ9 66 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 HSPE1-MOB4S4R3N1 261 aa10.4□□□□□ -0.74
USF1-206ENST00000491629 CCL24O00175 119 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 MGST3O14880 152 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 ENTPD6O75354 484 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 HMGN1P05114 100 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 OSMP13725 252 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 BCL3P20749 454 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 SLC6A1P30531 599 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 SNU13P55769 128 aaKnown RBP10.39□□□□□ -0.75
USF1-206ENST00000491629 CXCR4P61073 352 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 ODF4Q2M2E3 257 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 ZNF322Q6U7Q0 402 aaPredicted RBP10.39□□□□□ -0.75
USF1-206ENST00000491629 TRAPPC6BQ86SZ2 158 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 ZNF596Q8TC21 504 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 CHPT1Q8WUD6 406 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 ASB17Q8WXJ9 295 aa10.39□□□□□ -0.75
USF1-206ENST00000491629 A0A087X0M5 115 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 LCE6AA0A183 80 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 A0A1B0GX30 115 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 A0A1W2PPI3 338 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 MAGEA13PA6NCF6 341 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 M0QZK8 103 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 SIRPB1O00241 398 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 RPLP1P05386 114 aaKnown RBP10.38□□□□□ -0.75
USF1-206ENST00000491629 PRKACGP22612 351 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 AESQ08117 197 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 C17orf58Q2M2W7 97 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 SPATS1Q496A3 300 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 OR52W1Q6IF63 320 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 SSX6Q7RTT6 188 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 THNSL2Q86YJ6 484 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 FAM58AQ8N1B3 248 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 COQ2Q96H96 371 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 DCLRE1BQ9H816 532 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 MOB1AQ9H8S9 216 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 SLC25A19Q9HC21 320 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 TAGLN3Q9UI15 199 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.38□□□□□ -0.75
USF1-206ENST00000491629 SLC7A11Q9UPY5 501 aa10.38□□□□□ -0.75
USF1-206ENST00000491629 IGKV1-9A0A0C4DH69 117 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 IGKV1-12A0A0C4DH73 117 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 TRBV2A0A0J9YWF9 115 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 SERPINE3A8MV23 424 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 M0R129 80 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 SNX3O60493 162 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 IGKV1D-12P01611 117 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 IGHG2P01859 326 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 CGB3P0DN86 165 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 CGB7P0DN87 165 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 CHATP28329 748 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 ECI1P42126 302 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 FUT6P51993 359 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 RAB25P57735 213 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 LSAMPQ13449 338 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 KPNB1Q14974 876 aaKnown RBP10.37□□□□□ -0.75
USF1-206ENST00000491629 SLX4IPQ5VYV7 408 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 CATSPERDQ86XM0 798 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 SBSPONQ8IVN8 264 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 STPG2Q8N412 459 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 OR56B4Q8NH76 319 aa10.37□□□□□ -0.75
USF1-206ENST00000491629 NR1H4Q96RI1 486 aaPredicted RBP10.37□□□□□ -0.75
USF1-206ENST00000491629 CHST5Q9GZS9 411 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms