RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 GAPDHP04406 335 aaKnown RBP11.27□□□□□ -0.61
SHOX2-205ENST00000490689 DDTP30046 118 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 CLN3Q13286 438 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 CPT1CQ8TCG5 803 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 BSCL2Q96G97 398 aaPredicted RBP11.27□□□□□ -0.61
SHOX2-205ENST00000490689 SLC25A22Q9H936 323 aa11.27□□□□□ -0.61
SHOX2-205ENST00000490689 NLRC5Q86WI3 1866 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 KIR2DS1A0A191URI9 304 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF217O75362 1048 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 KIR2DL1P43626 348 aaPredicted RBP11.26□□□□□ -0.61
SHOX2-205ENST00000490689 KIR2DS4P43632 304 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
SHOX2-205ENST00000490689 RND3P61587 244 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 KIR2DS1Q14954 304 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF574Q6ZN55 896 aaPredicted RBP11.26□□□□□ -0.61
SHOX2-205ENST00000490689 VASH2Q86V25 355 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 MYPOPQ86VE0 399 aaPredicted RBP11.26□□□□□ -0.61
SHOX2-205ENST00000490689 NTNG2Q96CW9 530 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 ADAM19Q9H013 955 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 MAP1LC3B2A6NCE7 125 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 GJE1A6NN92 205 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 RAMP1O60894 148 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 CXorf66Q5JRM2 361 aaPredicted RBP11.26□□□□□ -0.61
SHOX2-205ENST00000490689 FIP1L1Q6UN15 594 aaKnown RBP11.26□□□□□ -0.61
SHOX2-205ENST00000490689 TOMM20LQ6UXN7 152 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 MAP1LC3BQ9GZQ8 125 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 PCOLCE2Q9UKZ9 415 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 DMRT1Q9Y5R6 373 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 SPTA1P02549 2419 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 LIPT2A6NK58 231 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 PTBP3O95758 552 aaKnown RBP11.26□□□□□ -0.61
SHOX2-205ENST00000490689 PCBD1P61457 104 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 TGFBR3Q03167 851 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 TBC1D26Q86UD7 250 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 SLC25A43Q8WUT9 341 aaPredicted RBP11.26□□□□□ -0.61
SHOX2-205ENST00000490689 MYOZ1Q9NP98 299 aaPredicted RBP11.26□□□□□ -0.61
SHOX2-205ENST00000490689 ZDBF2Q9HCK1 2354 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 FANCMQ8IYD8 2048 aa11.26□□□□□ -0.61
SHOX2-205ENST00000490689 CLEC18AA5D8T8 446 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 TNFSF11O14788 317 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF25P17030 456 aaPredicted RBP11.25□□□□□ -0.61
SHOX2-205ENST00000490689 GALR1P47211 349 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 PKIAP61925 76 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 MSMO1Q15800 293 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 CDCP2Q5VXM1 449 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 DBX2Q6ZNG2 339 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 CLEC18CQ8NCF0 446 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 SMIM8Q96KF7 97 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
SHOX2-205ENST00000490689 TREM2Q9NZC2 230 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 ERRFI1Q9UJM3 462 aaPredicted RBP11.25□□□□□ -0.61
SHOX2-205ENST00000490689 TRAV39A0A0B4J263 110 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 NPIPB9F8W1W9 429 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 CXCL13O43927 109 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 KRASP01116 189 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 TMEM50BP56557 158 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 ABCA7Q8IZY2 2146 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 CRIPAKQ8N1N5 446 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 NAT6Q93015 286 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 A0A1W2PPC4 97 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 A8MXE2 369 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 MPPED1O15442 326 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 SPINK4O60575 86 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 PRF1P14222 555 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 TMEM241Q24JQ0 296 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 ADPRHL1Q8NDY3 354 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 RTN4RQ9BZR6 473 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 CACNG5Q9UF02 275 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 IL17BQ9UHF5 180 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 MMP17Q9ULZ9 603 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF318Q5VUA4 2279 aa11.25□□□□□ -0.61
SHOX2-205ENST00000490689 A0A1W2PQF6 199 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 ATXN7O15265 892 aaPredicted RBP11.24□□□□□ -0.61
SHOX2-205ENST00000490689 DANCRP0C864 163 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 CCL2P13500 99 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 GPM6AP51674 278 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 ENDOGQ14249 297 aaKnown RBP11.24□□□□□ -0.61
SHOX2-205ENST00000490689 RNF151Q2KHN1 245 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 FDX2Q6P4F2 183 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 LHFPL2Q6ZUX7 228 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 GAPTQ8N292 157 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 BMPERQ8N8U9 685 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 LRRC75AQ8NAA5 344 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF519Q8TB69 540 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 PLPPR2Q96GM1 343 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 ADGRG7Q96K78 797 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 ZNF665Q9H7R5 613 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 FAM206AQ9NX38 181 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 TP53TG5Q9Y2B4 290 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 DOCK7Q96N67 2140 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 TMEM14DPA8MWL7 114 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 MS4A18H0YCH9 400 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 PPYP01298 95 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 TRGC1P0CF51 173 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 NTF3P20783 257 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 GABRA4P48169 554 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 CSRP2Q16527 193 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 MS4A18Q3C1V0 323 aa11.24□□□□□ -0.61
SHOX2-205ENST00000490689 OR10A7Q8NGE5 316 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms