RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 LINC01548A6NM66 108 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 LEUTXA8MZ59 168 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 CCNB2O95067 398 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 IGLV1-47P01700 117 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 ATP6V1B1P15313 513 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 H2AFXP16104 143 aaPredicted RBP7.05□□□□□ -1.28
SRRM1-217ENST00000490543 SNAPC1Q16533 368 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 CLVS2Q5SYC1 327 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 PLBD1Q6P4A8 553 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 TRMT10AQ8TBZ6 339 aaKnown RBP7.05□□□□□ -1.28
SRRM1-217ENST00000490543 SNX22Q96L94 193 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 ZNF286AQ9HBT8 521 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 PALMDQ9NP74 551 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 SPAG4Q9NPE6 437 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 PAPOLBQ9NRJ5 636 aaKnown RBP7.05□□□□□ -1.28
SRRM1-217ENST00000490543 LINC00312Q9Y6C7 94 aa7.05□□□□□ -1.28
SRRM1-217ENST00000490543 CSMD3Q7Z407 3707 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 IGKV1-27A0A075B6S5 117 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 ARRDC5A6NEK1 342 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 ACOD1A6NK06 481 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 SERPINE3A8MV23 424 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 SEC14L6B5MCN3 397 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 LY6LH3BQJ8 138 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 M0QZK8 103 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 ARPC2O15144 300 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 DHRS3O75911 302 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 TTRP02766 147 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 CDK2P24941 298 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 DUSP1P28562 367 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 SLC6A1P30531 599 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 ESRRGP62508 458 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 CBX1P83916 185 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 MFGE8Q08431 387 aaPredicted RBP7.04□□□□□ -1.28
SRRM1-217ENST00000490543 IL24Q13007 206 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 GRK1Q15835 563 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 TPTE2P1Q5T6R2 138 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 C9orf66Q5T8R8 295 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 ADAMTSL5Q6ZMM2 481 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 ZBTB49Q6ZSB9 765 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 OVCH2Q7RTZ1 564 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 BBS1Q8NFJ9 593 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 CHPT1Q8WUD6 406 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 SLAMF9Q96A28 289 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 NSMCE2Q96MF7 247 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 NIPSNAP1Q9BPW8 284 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 DGCR6LQ9BY27 220 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 CADM1Q9BY67 442 aaKnown RBP7.04□□□□□ -1.28
SRRM1-217ENST00000490543 TTTY10Q9BZA0 68 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 PKIBQ9C010 78 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 DCLRE1BQ9H816 532 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 MOB4Q9Y3A3 225 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 HSPE1-MOB4S4R3N1 261 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 U3KQV3 271 aa7.04□□□□□ -1.28
SRRM1-217ENST00000490543 A0A1B0GTI1 187 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM230AA0A1W2PPH8 454 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM90A18PA6NE21 464 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM90A16PA6NEW6 464 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM90A20PA6NIJ5 464 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM90A9PA6NNJ1 464 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM90A12PA8MX19 464 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM90A5PA8MXJ8 464 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 BUB1B-PAK6H3BSN5 160 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 DLGAP1O14490 977 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 MAGEB4O15481 346 aaPredicted RBP7.03□□□□□ -1.28
SRRM1-217ENST00000490543 HAND1O96004 215 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM90A15PP0C7V4 464 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM90A13PP0C7W8 464 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM90A14PP0C7W9 464 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 FAM90A24PP0C7X0 464 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 CALCBP10092 127 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 GABRR1P24046 479 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 PEX2P28328 305 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 HNF4GQ14541 408 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 MICAQ29983 383 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 HLA-DRB5Q30154 266 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 HEPN1Q6WQI6 88 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 MEPCEQ7L2J0 689 aaKnown RBP7.03□□□□□ -1.28
SRRM1-217ENST00000490543 TRAPPC6BQ86SZ2 158 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 RTN4RL2Q86UN3 420 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 CPOQ8IVL8 374 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 OR5M8Q8NGP6 311 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 OR14K1Q8NGZ2 314 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 ZNF596Q8TC21 504 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 ITFG2Q969R8 447 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 CEP19Q96LK0 163 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 C8orf49Q96NF6 230 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 DNAJB9Q9UBS3 223 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 NUFIP1Q9UHK0 495 aaKnown RBP7.03□□□□□ -1.28
SRRM1-217ENST00000490543 MAGEL2Q9UJ55 1249 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 LAMP5Q9UJQ1 280 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 MYRFQ9Y2G1 1151 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 ZNF256Q9Y2P7 627 aaPredicted RBP7.03□□□□□ -1.28
SRRM1-217ENST00000490543 SMAD5-AS1Q9Y6J3 95 aa7.03□□□□□ -1.28
SRRM1-217ENST00000490543 STARD9Q9P2P6 4700 aa7.02□□□□□ -1.29
SRRM1-217ENST00000490543 PRR23D1E9PI22 279 aaPredicted RBP7.02□□□□□ -1.29
SRRM1-217ENST00000490543 H3BN98 237 aa7.02□□□□□ -1.29
SRRM1-217ENST00000490543 CCDC22O60826 627 aa7.02□□□□□ -1.29
SRRM1-217ENST00000490543 SRSF10O75494 262 aaKnown RBP7.02□□□□□ -1.29
SRRM1-217ENST00000490543 FAM106CPP0CH98 169 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms