RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 SLC35B3Q9H1N7 401 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 SRMSQ9H3Y6 488 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 RGCCQ9H4X1 137 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 ELOVL3Q9HB03 270 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 PLEKHA2Q9HB19 425 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 MMP25Q9NPA2 562 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 C19orf12Q9NSK7 152 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 FAM212BQ9NTI7 297 aaPredicted RBP2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 SERTAD4Q9NUC0 356 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 TAS2R4Q9NYW5 299 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 DOK5Q9P104 306 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 LRIT1Q9P2V4 623 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 WNT16Q9UBV4 365 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 FBXL17Q9UF56 701 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 LAMP5Q9UJQ1 280 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 PILRAQ9UKJ1 303 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 DHDHQ9UQ10 334 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 SLC17A4Q9Y2C5 497 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 MEMO1Q9Y316 297 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 MRPS18BQ9Y676 258 aaKnown RBP2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 CACNA1EQ15878 2313 aa2.99□□□□□ -1.93
CRNKL1-203ENST00000490258 DOCK10Q96BY6 2186 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 KNL1Q8NG31 2342 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 EPG5Q9HCE0 2579 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 TRAV1-1A0A0B4J248 108 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 IGHV3-20A0A0C4DH32 117 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 A0A0U1RQK1 487 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 LOC107986453A0A1B0GWG9 222 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 A0A1W2PNU3 283 aaPredicted RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 A0A1W2PPE2 198 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 LNP1A1A4G5 178 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 ZNF320A2RRD8 509 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 OR5H15A6NDH6 313 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 OR5H1A6NKK0 313 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 C4orf47A7E2U8 309 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 FOXI3A8MTJ6 420 aaPredicted RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 A8MWP6 167 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 UMAD1C9J7I0 102 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 K7EPK0 472 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 PSMD9O00233 223 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 CLDN4O14493 209 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 DVL1O14640 695 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 HSD17B6O14756 317 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 PPP1R2P9O14990 202 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 SMAD9O15198 467 aaKnown RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 RRP8O43159 456 aaKnown RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 KCNAB3O43448 404 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 FGF17O60258 216 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 HIST1H2BKO60814 126 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 YIF1AO95070 293 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 OR2C1O95371 312 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 IGKV1D-16P01601 117 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 SERPINA5P05154 406 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 HIST1H2BJP06899 126 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 SFTPBP07988 381 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 SOD3P08294 240 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 SPARCP09486 303 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 OR5AC1P0C628 307 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 NHLRC4P0CG21 123 aaPredicted RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 SLC35E2P0CK97 266 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 COX5BP10606 129 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 LIPCP11150 499 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 CTSEP14091 401 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 HIST1H1DP16402 221 aaKnown RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 NDUFB7P17568 137 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 ZNF10P21506 573 aaPredicted RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 FGF7P21781 194 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 HIST1H2BOP23527 126 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 GABRR1P24046 479 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 CD27P26842 260 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 CHATP28329 748 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 CRABP1P29762 137 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 RPL12P30050 165 aaKnown RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 GCH1P30793 250 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 TLX1P31314 330 aaPredicted RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 HIST1H2BBP33778 126 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 GABRA3P34903 492 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 AKR1C3P42330 323 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 P2RY1P47900 373 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 NPY4RP50391 375 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 HIST1H2BDP58876 126 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 OR2B8PP59922 312 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 NUTF2P61970 127 aaKnown RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 HIST1H2BCP62807 126 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 SLC35A1P78382 337 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 BTG2P78543 158 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 CCL7P80098 99 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 SSBP2P81877 361 aaPredicted RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 PSG6Q00889 435 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 RPL18Q07020 188 aaKnown RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 SPOCK1Q08629 439 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 SKP2Q13309 424 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 BIKQ13323 160 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 GAMTQ14353 236 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 JOSD1Q15040 202 aaPredicted RBP2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 RAB35Q15286 201 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 UBE2V2Q15819 145 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 FAM189A2Q15884 450 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 HIST2H2BEQ16778 126 aa2.98□□□□□ -1.93
CRNKL1-203ENST00000490258 MEP1BQ16820 701 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms