RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 FBXO17Q96EF6 278 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 MS4A4EQ96PG1 132 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 APOOQ9BUR5 198 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 OR2S2Q9NQN1 319 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 CALML5Q9NZT1 146 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 VDAC3Q9Y277 283 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 TRAV39A0A0B4J263 110 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 FAM231BA6NCW3 169 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 M0R143 59 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 SOX15O60248 233 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 MT-ND4LP03901 98 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 GKN3PP0CG01 181 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 GABRA1P14867 456 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 UGT2B7P16662 529 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 AP3S2P59780 193 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 CYCSP99999 105 aaKnown RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 SURF2Q15527 256 aaPredicted RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF630Q2M218 657 aaPredicted RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 DNLZQ5SXM8 178 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 NCMAPQ5T1S8 102 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 TMUB2Q71RG4 321 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 CYP4Z1Q86W10 505 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 FUNDC1Q8IVP5 155 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 NPWQ8N729 165 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 NRACQ8N912 160 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 OR10D4PQ8NGN7 298 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 OR2G2Q8NGZ5 317 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 ARL11Q969Q4 196 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 MOCOSQ96EN8 888 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF514Q96K75 400 aaPredicted RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 KCTD7Q96MP8 289 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 NOL4LQ96MY1 436 aaPredicted RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 CCDC115Q96NT0 180 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 IL17FQ96PD4 163 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 RNF157Q96PX1 679 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 RERGLQ9H628 205 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 REEP1Q9H902 201 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 ASF1BQ9NVP2 202 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 DMAC2Q9NW81 257 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 Q9UF83 564 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 KCNE3Q9Y6H6 103 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 MYO18AQ92614 2054 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 GREB1Q4ZG55 1949 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 IGLV3-22A0A075B6J6 115 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 LINC01553A4QN01 128 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 MCRIP1C9JLW8 97 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CASKO14936 926 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CHST10O43529 356 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 XRCC2O43543 280 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SLC19A2O60779 497 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 RPP14O95059 124 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 FARS2O95363 451 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CALCAP01258 141 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 PMP2P02689 132 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TCRBP04435 133 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 GIPP09681 153 aaPredicted RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CD3GP09693 182 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 GGT1P19440 569 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 FGF7P21781 194 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SLC6A1P30531 599 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 GLP1RP43220 463 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 MAGEA6P43360 314 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF121P58317 390 aaPredicted RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CRADDP78560 199 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CDK6Q00534 326 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TMEM187Q14656 261 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SCGB2B2Q4G0G5 96 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 MS4A13Q5J8X5 152 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 C9orf64Q5T6V5 341 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 C9orf135Q5VTT2 229 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CXCL17Q6UXB2 119 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 LRRC28Q86X40 367 aaPredicted RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 KLHDC8BQ8IXV7 354 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF843Q8N446 348 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 GPR26Q8NDV2 337 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 RPLP0P6Q8NHW5 317 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TMEM203Q969S6 136 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 SLC25A46Q96AG3 418 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CYP2S1Q96SQ9 504 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 VPS25Q9BRG1 176 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 ADAT1Q9BUB4 502 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 PARD6GQ9BYG4 376 aaPredicted RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 PRORYQ9H606 182 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 RNF122Q9H9V4 155 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TMEM138Q9NPI0 162 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 NLE1Q9NVX2 485 aaPredicted RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 NXT1Q9UKK6 140 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 YARS2Q9Y2Z4 477 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 DENND4CQ5VZ89 1909 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 IGKV6D-21A0A0A0MT36 114 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 KANTRA0A1W2PQU2 76 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CXCR6O00574 342 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 RFXANKO14593 260 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 PHOX2AO14813 284 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TGOLN2O43493 480 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 TCF21O43680 179 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 EEDO75530 441 aaKnown RBP2.27□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF682O95780 498 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 CRHP06850 196 aa2.27□□□□□ -2.05
UBXN4-208ENST00000490163 GUSBP08236 651 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms