RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 ATP8B1O43520 1251 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 SYNGR1O43759 233 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 ANGPTL7O43827 346 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 CHST1O43916 411 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 SRSF10O75494 262 aaKnown RBP5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 HMGN1P05114 100 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 PGA5P0DJD9 388 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 PRR23D2P0DMB1 279 aaPredicted RBP5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 T-ENOLP0DO92 83 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 PAICSP22234 425 aaKnown RBP5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 POU1F1P28069 291 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 PRDX2P32119 198 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 MNAT1P51948 309 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 ERVK11-1P61568 191 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 RPL31P62899 125 aaKnown RBP5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 EFNB1P98172 346 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 EMX1Q04741 257 aaPredicted RBP5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 RIPPLY1Q0D2K3 151 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 LY6EQ16553 131 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 FAM98BQ52LJ0 330 aaKnown RBP5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 DMRTC1Q5HYR2 192 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 AWAT2Q6E213 333 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 PLBD1Q6P4A8 553 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 KCTD8Q6ZWB6 473 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 CPLX4Q7Z7G2 160 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 LHFPL4Q7Z7J7 247 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 DHFR2Q86XF0 187 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 ZNF561Q8N587 486 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 PAPD5Q8NDF8 572 aaKnown RBP5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 WFDC9Q8NEX5 89 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 BBS1Q8NFJ9 593 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 OR51G2Q8NGK0 314 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 OR4C13Q8NGP0 309 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 TEX47Q8TBZ9 253 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 OR51E1Q8TCB6 317 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 OR8B4Q96RC9 309 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 TEAD3Q99594 435 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 NRIP2Q9BQI9 281 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 CHID1Q9BWS9 393 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 YIPF3Q9GZM5 350 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 FAM107BQ9H098 131 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 RAB18Q9NP72 206 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 NUFIP1Q9UHK0 495 aaKnown RBP5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 ARL2BPQ9Y2Y0 163 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 COL7A1Q02388 2944 aa5.11□□□□□ -1.59
PRPF40A-210ENST00000489741 A0A1B0GTI1 187 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 TMEM269A0A1B0GVZ9 245 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 PQLC2LA1A4F0 135 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 CCDC182A6NF36 153 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 OR5B21A6NL26 309 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 FAM90A22PA8MWA6 464 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 ODF3BA8MYP8 253 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 H3BN98 237 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 J3QT63 122 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 K7N7A8 449 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 ZNF254O75437 659 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 E2F6O75461 281 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 DCTN3O75935 186 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 CST1P01037 141 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 NRASP01111 189 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 RBP4P02753 201 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 TTRP02766 147 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 PRB2P02812 416 aaPredicted RBP5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 TK1P04183 234 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 CD28P10747 220 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 CCL3L1P16619 93 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 MPZP25189 248 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 RAB13P51153 203 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 DYNLT3P51808 116 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 BMXP51813 675 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 ZNF273Q14593 569 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 LCN1P1Q5VSP4 162 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 KCTD18Q6PI47 426 aaPredicted RBP5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 HAGHLQ6PII5 290 aaPredicted RBP5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 MOB3CQ70IA8 216 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 KRT77Q7Z794 578 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 NDUFA11Q86Y39 141 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 ZNF679Q8IYX0 411 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 HS3ST5Q8IZT8 346 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 FAM185AQ8N0U4 392 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 TMEM185AQ8NFB2 350 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 OR11H6Q8NGC7 330 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 OR2T27Q8NH04 317 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 OR2T6Q8NHC8 308 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 FAM81AQ8TBF8 368 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 CANT1Q8WVQ1 401 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 OTULINQ96BN8 352 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 ASB9Q96DX5 294 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 MALSU1Q96EH3 234 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 NSL1Q96IY1 281 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 ZNF488Q96MN9 340 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 NPFFR1Q9GZQ6 430 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 PBOV1Q9GZY1 135 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 MMP28Q9H239 520 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 SEBOXQ9HB31 216 aaPredicted RBP5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 SLC25A19Q9HC21 320 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 GPR84Q9NQS5 396 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 TAS2R1Q9NYW7 299 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 USE1Q9NZ43 259 aa5.1□□□□□ -1.59
PRPF40A-210ENST00000489741 DNAJB9Q9UBS3 223 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms